Aliases for LOC101929006 Gene

Subcategory (RNA class) for LOC101929006 Gene

ncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC101929006 Gene

  • Uncharacterized LOC101929006 3
  • NONHSAG045640.2 91
  • NONHSAG045830.2 91
  • NONHSAG046538.2 91
  • NONHSAG046018.2 91
  • NONHSAG043350.2 91
  • HSALNG0049045 164
  • Lnc-OR14J1-2 165

External Ids for LOC101929006 Gene

Additional External Ids for LOC101929006 Gene

Previous GeneCards Identifiers for LOC101929006 Gene

  • GC06U902454
  • GC06Pl29192

Summaries for LOC101929006 Gene

GeneCards Summary for LOC101929006 Gene

LOC101929006 (Uncharacterized LOC101929006) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929006 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101929006 Gene

Genomics for LOC101929006 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101929006 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J029235 Enhancer 0.5 Ensembl 0.4 +12.3 12327 2 ZNF316 FOXA2 MAFF MAFK YY1 MAFG EMSY TRIM27 TRIM26 HLA-A HLA-U LOC105375006 lnc-OR2J2-3 piR-37972-588 ENSG00000197171 LOC101929006 OR14J1
GH06J029226 Enhancer 0.2 Ensembl 0.7 +2.4 2427 0.6 TRIM27 OR2W1 OR14J1 MICD ENSG00000197171 LOC101929006 OR2G1P OR2J2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929006 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101929006 Gene

Genomic Locations for LOC101929006 Gene
chr6:29,223,874-29,290,440
(GRCh38/hg38)
Size:
66,567 bases
Orientation:
Plus strand

Genomic View for LOC101929006 Gene

Genes around LOC101929006 on UCSC Golden Path with GeneCards custom track
LOC101929006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101929006 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929006 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for LOC101929006 Gene

Post-translational modifications for LOC101929006 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929006 Gene

Domains & Families for LOC101929006 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101929006 Gene

Function for LOC101929006 Gene

Phenotypes From GWAS Catalog for LOC101929006 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929006 Gene

Localization for LOC101929006 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929006 Gene

Pathways & Interactions for LOC101929006 Gene

PathCards logo

SuperPathways for LOC101929006 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101929006 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101929006 Gene

Drugs & Compounds for LOC101929006 Gene

No Compound Related Data Available

Transcripts for LOC101929006 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101929006 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000023ED8_9606 lncRNA 464 4

Ensembl: ENST00000411485 (view in UCSC) , ENST00000416315 (view in UCSC) , ENST00000419230 (view in UCSC) , ENST00000445920 (view in UCSC) ,

LncBook: HSALNT0103490, HSALNT0103491, HSALNT0103492, HSALNT0103493, HSALNT0103494,

LNCipedia: lnc-OR14J1-2:1,

NONCODE: NONHSAT108516.2, NONHSAT116516.2, NONHSAT116868.2, NONHSAT117219.2, NONHSAT118236.2,

URS0000A76D4E_9606 lncRNA 464 1

RefSeq: NR_134629,

URS0000A76F54_9606 lncRNA 394 1

RefSeq: NR_134630,

URS00008BBCAE_9606 lncRNA 452 3

LncBook: HSALNT0103489,

LNCipedia: lnc-OR14J1-2:2,

NONCODE: NONHSAT108515.2,

URS0000D6E064_9606 lncRNA 394 1

LNCipedia: lnc-OR14J1-2:4,

LOC101929006 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101929006 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929006 Gene

No ASD Table

Relevant External Links for LOC101929006 Gene

GeneLoc Exon Structure for
LOC101929006

Expression for LOC101929006 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101929006 Gene

genes like me logo Genes that share expression patterns with LOC101929006: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929006 Gene

Orthologs for LOC101929006 Gene

No data available for Orthologs and Evolution for LOC101929006 Gene

Paralogs for LOC101929006 Gene

No data available for Paralogs for LOC101929006 Gene

Variants for LOC101929006 Gene

Additional dbSNP identifiers (rs#s) for LOC101929006 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929006 Gene

Disorders for LOC101929006 Gene

No disorders were found for LOC101929006 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929006 Gene

Publications for LOC101929006 Gene

No publications were found for LOC101929006 Gene.

No data available for Mastermind for LOC101929006 Gene

Products for LOC101929006 Gene

Sources for LOC101929006 Gene