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Aliases for LOC101929004 Gene

Subcategory (RNA class) for LOC101929004 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101929004 Gene

  • Uncharacterized LOC101929004 3

External Ids for LOC101929004 Gene

Previous GeneCards Identifiers for LOC101929004 Gene

  • GC06U902481

Summaries for LOC101929004 Gene

GeneCards Summary for LOC101929004 Gene

LOC101929004 (Uncharacterized LOC101929004) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929004 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929004 Gene

Genomics for LOC101929004 Gene

GeneHancer (GH) Regulatory Elements for LOC101929004 Gene

Promoters and enhancers for LOC101929004 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J089145 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 600.7 +1.3 1322 3.2 ELF3 MNT NKRF POLR2A ZNF121 ZNF384 ZNF687 ZSCAN21 TFE3 YY1 LOC101929004 PM20D2 SRSF12 ANKRD6
GH06J089140 Enhancer 1.1 Ensembl ENCODE 0.4 +7.6 7622 1.8 ELF3 ZNF121 CEBPG SP7 SP1 HNF1A PPARG SP5 PRDM1 KAT8 SRSF12 LOC101929004 PM20D2
GH06J089161 Enhancer 0.7 Ensembl ENCODE 0.4 -14.3 -14278 2.4 PRDM1 ZNF623 CTCF ZNF664 SRSF12 PM20D2 LOC101929004 GABRR1
GH06J089128 Enhancer 0.7 Ensembl 0.4 +18.7 18722 0.8 MLLT1 TRIM24 MTA1 HDAC1 NR2C1 SOX6 MTA3 NFE2 FOXA2 MAFG SRSF12 PM20D2 LOC101929004
GH06J089218 Promoter 1.1 EPDnew Ensembl 0.2 -70.1 -70078 0.4 PKNOX1 GABRR1 SRSF12 PM20D2 LOC101929004
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101929004 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101929004 Gene

Genomic Locations for LOC101929004 Gene
chr6:89,131,481-89,147,723
(GRCh38/hg38)
Size:
16,243 bases
Orientation:
Minus strand

Genomic View for LOC101929004 Gene

Genes around LOC101929004 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929004 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929004 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929004 Gene

Proteins for LOC101929004 Gene

Post-translational modifications for LOC101929004 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929004 Gene

Domains & Families for LOC101929004 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929004 Gene

Function for LOC101929004 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929004 Gene

Localization for LOC101929004 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929004 Gene

Pathways & Interactions for LOC101929004 Gene

PathCards logo

SuperPathways for LOC101929004 Gene

No Data Available

Interacting Proteins for LOC101929004 Gene

Gene Ontology (GO) - Biological Process for LOC101929004 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929004 Gene

Drugs & Compounds for LOC101929004 Gene

No Compound Related Data Available

Transcripts for LOC101929004 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929004 Gene

No ASD Table

Relevant External Links for LOC101929004 Gene

GeneLoc Exon Structure for
LOC101929004

No data available for mRNA/cDNA for LOC101929004 Gene

Expression for LOC101929004 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929004 Gene

Orthologs for LOC101929004 Gene

No data available for Orthologs and Evolution for LOC101929004 Gene

Paralogs for LOC101929004 Gene

No data available for Paralogs for LOC101929004 Gene

Variants for LOC101929004 Gene

Sequence variations from dbSNP and Humsavar for LOC101929004 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000001820 -- 89,141,424(-) G/A intron_variant
rs1000024219 -- 89,137,736(-) A/G intron_variant
rs1000648841 -- 89,134,577(-) C/T intron_variant
rs1000762197 -- 89,141,511(-) G/A/T intron_variant
rs1001377954 -- 89,141,788(-) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101929004 Gene

Disorders for LOC101929004 Gene

No disorders were found for LOC101929004 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929004 Gene

Publications for LOC101929004 Gene

No publications were found for LOC101929004 Gene.

No data available for External Links for LOC101929004 Gene

Products for LOC101929004 Gene

Sources for LOC101929004 Gene

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