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Aliases for LOC101928988 Gene

Subcategory (RNA class) for LOC101928988 Gene


Quality Score for this RNA gene is


Aliases for LOC101928988 Gene

  • Uncharacterized LOC101928988 3
  • Novel Transcript, Antisense To DAPK2 5
  • AC015914.1 5

External Ids for LOC101928988 Gene

Previous GeneCards Identifiers for LOC101928988 Gene

  • GC15U901549

Summaries for LOC101928988 Gene

GeneCards Summary for LOC101928988 Gene

LOC101928988 (Uncharacterized LOC101928988) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928988 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928988 Gene

Genomics for LOC101928988 Gene

GeneHancer (GH) Regulatory Elements for LOC101928988 Gene

Promoters and enhancers for LOC101928988 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J063928 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.6 555 1.5 ELF3 TFE3 CEBPA GATAD2A RXRB GABPA HES1 SOX13 FOXA2 SAP130 LOC101928988 DAPK2 HERC1
GH15J063912 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.1 -12.5 -12534 5.8 CEBPG CTCF SP7 ZNF600 PRDM10 ZIC2 CEBPA ZEB2 ZNF639 ZNF629 DAPK2 CSNK1G1 HERC1 TRIP4 LOC101928988 ENSG00000265967 SNX1 TPM1-AS SNX22 TPM1
GH15J063905 Enhancer 1 Ensembl ENCODE dbSUPER 10 -20.7 -20666 6.8 ZNF121 MAFK ZNF600 PRDM10 ZIC2 ZNF316 POLR2A NR2F2 ZNF335 ADNP DAPK2 HERC1 LOC101928988 PPIB TPM1-AS ENSG00000275785
GH15J063544 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 5 -383.4 -383373 1.4 CBFA2T2 PRDM1 SMARCA4 IKZF1 ARID2 DPF2 IKZF2 MTA2 PAX8 TCF12 TRIP4 USP3-AS1 CA12 CSNK1G1 USP3 FBXL22 LOC101928988
GH15J063796 Enhancer 1.2 Ensembl ENCODE dbSUPER 5.5 -124.9 -124874 15.6 CBFA2T2 ZNF121 TRIM24 PPARG SMARCA4 IKZF1 DPF2 RFX1 PKNOX1 HDAC1 HERC1 DAPK2 USP3-AS1 MIR422A FBXL22 LOC101928988 ENSG00000259589
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928988 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928988 Gene

Genomic Locations for LOC101928988 Gene
7,680 bases
Plus strand
7,680 bases
Plus strand

Genomic View for LOC101928988 Gene

Genes around LOC101928988 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928988 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928988 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928988 Gene

Proteins for LOC101928988 Gene

Post-translational modifications for LOC101928988 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928988 Gene

Domains & Families for LOC101928988 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928988 Gene

Function for LOC101928988 Gene

Phenotypes From GWAS Catalog for LOC101928988 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928988 Gene

Localization for LOC101928988 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928988 Gene

Pathways & Interactions for LOC101928988 Gene

PathCards logo

SuperPathways for LOC101928988 Gene

No Data Available

Interacting Proteins for LOC101928988 Gene

Gene Ontology (GO) - Biological Process for LOC101928988 Gene


No data available for Pathways by source and SIGNOR curated interactions for LOC101928988 Gene

Drugs & Compounds for LOC101928988 Gene

No Compound Related Data Available

Transcripts for LOC101928988 Gene

mRNA/cDNA for LOC101928988 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928988 Gene

No ASD Table

Relevant External Links for LOC101928988 Gene

GeneLoc Exon Structure for

Expression for LOC101928988 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928988 Gene

Orthologs for LOC101928988 Gene

Evolution for LOC101928988 Gene

Gene Tree for LOC101928988 (if available)
Gene Tree for LOC101928988 (if available)

No data available for Orthologs for LOC101928988 Gene

Paralogs for LOC101928988 Gene

No data available for Paralogs for LOC101928988 Gene

Variants for LOC101928988 Gene

Sequence variations from dbSNP and Humsavar for LOC101928988 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000107348 -- 63,935,552(+) C/T non_coding_transcript_variant
rs1000459745 -- 63,935,235(+) C/T intron_variant
rs1000878157 -- 63,927,703(+) G/A upstream_transcript_variant
rs1001158101 -- 63,927,717(+) A/T upstream_transcript_variant
rs1001513909 -- 63,934,070(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928988 Gene

Variant ID Type Subtype PubMed ID
esv3636720 CNV loss 21293372
esv3636721 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101928988 Gene

Disorders for LOC101928988 Gene

No disorders were found for LOC101928988 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928988 Gene

Publications for LOC101928988 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

No data available for External Links for LOC101928988 Gene

Products for LOC101928988 Gene

Sources for LOC101928988 Gene

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