Aliases for LOC101928933 Gene

Subcategory (RNA class) for LOC101928933 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928933 Gene

  • Uncharacterized LOC101928933 3

External Ids for LOC101928933 Gene

Previous GeneCards Identifiers for LOC101928933 Gene

  • GC01U903915
  • GC01M180074
  • GC01M180122
  • GC01M180974
  • GC01M181063
  • GC01M180232
  • GC01M180332
  • GC01M180433
  • GC01M180527
  • GC01M180616
  • GC01M180714
  • GC01M180805
  • GC01M180898

Summaries for LOC101928933 Gene

GeneCards Summary for LOC101928933 Gene

LOC101928933 (Uncharacterized LOC101928933) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928933 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928933 Gene

Genomics for LOC101928933 Gene

GeneHancer (GH) Regulatory Elements for LOC101928933 Gene

Promoters and enhancers for LOC101928933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179951 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -0.1 -125 6 ZNF785 SP1 ZBTB40 CTCF SIX5 FOXA1 RBPJ SMARCE1 POLR2A ATF1 CEP350 ENSG00000260360 LOC101928933 piR-51619 LHX4 QSOX1 ACBD6 ENSG00000261831 RPSAP16
GH01J179929 Enhancer 1 Ensembl ENCODE 0.3 +23.8 23755 2.7 GATA3 TCF7L2 NR2F6 ZNF217 ZNF362 BCL6B SP7 ZSCAN21 PRDM1 ZBTB8A TOR1AIP1 TOR1AIP2 lnc-CEP350-3 ENSG00000261831 LOC101928933
GH01J179938 Enhancer 0.8 Ensembl 0.4 +16.1 16057 1.3 ZNF362 SP7 ZSCAN21 PRDM1 PKNOX1 TCF7L2 PRDM10 ZEB2 ZNF629 CEBPB TOR1AIP1 TOR1AIP2 QSOX1 ENSG00000261831 lnc-CEP350-3 LOC101928933
GH01J179926 Enhancer 0.9 Ensembl ENCODE 0.3 +28.1 28120 1.3 SP7 FOSL2 ZNF639 ZEB2 CEBPB ZNF629 JUN JUND SCRT2 ZSCAN5C TOR1AIP1 TOR1AIP2 ENSG00000261831 lnc-CEP350-3 LOC101928933
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928933 Gene

Genomic Locations for LOC101928933 Gene
chr1:179,926,390-179,954,671
(GRCh38/hg38)
Size:
28,282 bases
Orientation:
Minus strand

Genomic View for LOC101928933 Gene

Genes around LOC101928933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928933 Gene

Proteins for LOC101928933 Gene

Post-translational modifications for LOC101928933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928933 Gene

Domains & Families for LOC101928933 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928933 Gene

Function for LOC101928933 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928933 Gene

Localization for LOC101928933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928933 Gene

Pathways & Interactions for LOC101928933 Gene

PathCards logo

SuperPathways for LOC101928933 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928933 Gene

Drugs & Compounds for LOC101928933 Gene

No Compound Related Data Available

Transcripts for LOC101928933 Gene

mRNA/cDNA for LOC101928933 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928933 Gene

No ASD Table

Relevant External Links for LOC101928933 Gene

GeneLoc Exon Structure for
LOC101928933

Expression for LOC101928933 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928933 Gene

genes like me logo Genes that share expression patterns with LOC101928933: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928933 Gene

Orthologs for LOC101928933 Gene

No data available for Orthologs and Evolution for LOC101928933 Gene

Paralogs for LOC101928933 Gene

No data available for Paralogs for LOC101928933 Gene

Variants for LOC101928933 Gene

Sequence variations from dbSNP and Humsavar for LOC101928933 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000457894 -- 179,928,984(-) G/A intron_variant
rs1000838060 -- 179,943,587(-) G/A/C intron_variant
rs1000870946 -- 179,943,352(-) A/G intron_variant
rs1000880831 -- 179,953,325(-) G/A intron_variant, non_coding_transcript_variant
rs1001020495 -- 179,936,256(-) A/C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928933 Gene

Disorders for LOC101928933 Gene

No disorders were found for LOC101928933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928933 Gene

Publications for LOC101928933 Gene

No publications were found for LOC101928933 Gene.

No data available for External Links for LOC101928933 Gene

Products for LOC101928933 Gene

Sources for LOC101928933 Gene