Aliases for LOC101928909 Gene

Subcategory (RNA class) for LOC101928909 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for LOC101928909 Gene

  • Uncharacterized LOC101928909 3

External Ids for LOC101928909 Gene

Previous GeneCards Identifiers for LOC101928909 Gene

  • GC14U901425

Summaries for LOC101928909 Gene

GeneCards Summary for LOC101928909 Gene

LOC101928909 (Uncharacterized LOC101928909) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928909 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928909 Gene

Genomics for LOC101928909 Gene

GeneHancer (GH) Regulatory Elements for LOC101928909 Gene

Promoters and enhancers for LOC101928909 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J090640 Enhancer 1 ENCODE CraniofacialAtlas dbSUPER 500.7 -0.5 -474 3 TEAD4 SAP30 RFX1 HDAC2 FOXA2 SAP130 YY1 NANOG GATA3 SCRT1 ENSG00000259163 LOC101928909 TTC7B HSALNG0103150
GH14J090644 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 0.7 +3.0 2954 2.9 USF1 JUND TEAD4 RFX1 HDAC2 RXRA CEBPB FOS FOSL2 TCF12 TTC7B ENSG00000259163 LOC101928909 lnc-RPS6KA5-3
GH14J090623 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -17.9 -17906 1.8 USF1 TEAD4 EP300 TEAD1 MYC FOXA2 NFIC SMARCC1 FOS SAP130 HSALNG0103150 LOC101928909 TTC7B
GH14J090626 Enhancer 1.1 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -12.0 -12037 2.3 FOS CEBPB STAT3 STAT1 RCOR1 POLR2A HLF MYC MAX CEBPA TTC7B HSALNG0103150 LOC101928909
GH14J090614 Promoter/Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -26.6 -26625 2.6 ZFHX2 FOS GATA2 NR2F6 JUND JUN SP1 EGR2 POLR2A EGR1 HSALNG0103150 LOC101928909 TTC7B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928909 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928909 Gene

Genomic Locations for LOC101928909 Gene
chr14:90,642,629-90,648,891
(GRCh38/hg38)
Size:
6,263 bases
Orientation:
Plus strand

Genomic View for LOC101928909 Gene

Genes around LOC101928909 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928909 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928909 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928909 Gene

Proteins for LOC101928909 Gene

Post-translational modifications for LOC101928909 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928909 Gene

Domains & Families for LOC101928909 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928909 Gene

Function for LOC101928909 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928909 Gene

Localization for LOC101928909 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928909 Gene

Pathways & Interactions for LOC101928909 Gene

PathCards logo

SuperPathways for LOC101928909 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101928909 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928909 Gene

Drugs & Compounds for LOC101928909 Gene

No Compound Related Data Available

Transcripts for LOC101928909 Gene

mRNA/cDNA for LOC101928909 Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928909 Gene

No ASD Table

Relevant External Links for LOC101928909 Gene

GeneLoc Exon Structure for
LOC101928909

Expression for LOC101928909 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101928909 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928909

genes like me logo Genes that share expression patterns with LOC101928909: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928909 Gene

Orthologs for LOC101928909 Gene

No data available for Orthologs and Evolution for LOC101928909 Gene

Paralogs for LOC101928909 Gene

No data available for Paralogs for LOC101928909 Gene

Variants for LOC101928909 Gene

Additional dbSNP identifiers (rs#s) for LOC101928909 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928909 Gene

Disorders for LOC101928909 Gene

No disorders were found for LOC101928909 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928909 Gene

Publications for LOC101928909 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC101928909 Gene

Products for LOC101928909 Gene

Sources for LOC101928909 Gene