Aliases for LOC101928855 Gene

Data sources for LOC101928855 Gene:

RNA type for LOC101928855 Gene

lncRNA

Aliases for LOC101928855 Gene

External Ids for LOC101928855 Gene

Previous GeneCards Identifiers for LOC101928855 Gene

  • GC17U901862

Summaries for LOC101928855 Gene

GeneCards Summary for LOC101928855 Gene

LOC101928855 (Uncharacterized LOC101928855) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928855 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928855 Gene

Genomics for LOC101928855 Gene

GeneHancer (GH) Regulatory Elements Pubs


GeneHancers around LOC101928855 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928855 Gene

Latest Assembly
chr17:80,801,639-80,805,632
(GRCh38/hg38)
Size:
3,994 bases
Orientation:
Minus strand

Previous Assembly
chr17:78,775,440-78,779,432
(GRCh37/hg19 by Entrez Gene)
Size:
3,993 bases
Orientation:
Minus strand

chr17:78,775,440-78,779,432
(GRCh37/hg19 by Ensembl)
Size:
3,993 bases
Orientation:
Minus strand

Genomic View for LOC101928855 Gene

Genes around LOC101928855 on UCSC Golden Path with GeneCards custom track
LOC101928855 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101928855 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928855 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928855 Gene

Proteins for LOC101928855 Gene

Post-translational modifications for LOC101928855 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928855 Gene

Domains & Families for LOC101928855 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928855 Gene

Function for LOC101928855 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928855 Gene

Localization for LOC101928855 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928855 Gene

Pathways & Interactions for LOC101928855 Gene

PathCards logo

SuperPathways for LOC101928855 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928855 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928855 Gene

Drugs & Compounds for LOC101928855 Gene

No Compound Related Data Available

Transcripts for LOC101928855 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928855 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000014BF0C_9606 lncRNA 3204 4

RefSeq: NR_110852,

Ensembl: ENST00000570335 (view in UCSC) ,

LNCipedia: lnc-AATK-10:1,

NONCODE: NONHSAT056411.2,

URS00008B5676_9606 lncRNA 3196 1

LNCipedia: lnc-AATK-10:2,

LOC101928855 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928855 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928855 Gene

No ASD Table

Relevant External Links for LOC101928855 Gene

GeneLoc Exon Structure for
LOC101928855

Expression for LOC101928855 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101928855 Gene

genes like me logo Genes that share expression patterns with LOC101928855: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928855 Gene

Orthologs for LOC101928855 Gene

Evolution for LOC101928855 Gene

ENSEMBL:
Gene Tree for LOC101928855 (if available)
TreeFam:
Gene Tree for LOC101928855 (if available)

No data available for Orthologs for LOC101928855 Gene

Paralogs for LOC101928855 Gene

No data available for Paralogs for LOC101928855 Gene

Variants for LOC101928855 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101928855 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101928855 Gene

Variant ID Type Subtype PubMed ID
esv26223 CNV gain+loss 19812545
nsv509675 CNV insertion 20534489
nsv576164 CNV gain 21841781
nsv828128 CNV loss 20364138
nsv833563 CNV gain 17160897

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101928855 Gene

Disorders for LOC101928855 Gene

Additional Disease Information for LOC101928855

Open Targets Platform
Open Targets Platform

No disorders were found for LOC101928855 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928855 Gene

Publications for LOC101928855 Gene

No publications were found for LOC101928855 Gene.

No data available for Mastermind for LOC101928855 Gene

Products for LOC101928855 Gene

Sources for LOC101928855 Gene