LOC101928824 Gene (RNA Gene)

Uncharacterized LOC101928824

GC22P020495
GIFtS:
4

Aliases for LOC101928824 Gene

Subcategory (RNA class) for LOC101928824 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928824 Gene

  • Uncharacterized LOC101928824 3

External Ids for LOC101928824 Gene

Previous GeneCards Identifiers for LOC101928824 Gene

  • GC22U900955

Summaries for LOC101928824 Gene

GeneCards Summary for LOC101928824 Gene

LOC101928824 (Uncharacterized LOC101928824) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928824 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928824 Gene

Genomics for LOC101928824 Gene

GeneHancer (GH) Regulatory Elements for LOC101928824 Gene

Promoters and enhancers for LOC101928824 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH22J020494 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.3 -265 3.4 ZNF785 ZBTB40 CTCF LCORL SMARCE1 POLR2A MCM5 TRIM22 ZNF362 ZNF133 MED15 KLHL22 LOC101928824 lnc-MED15-1 LZTR1 DGCR8 TRMT2A ENSG00000235776 ENSG00000215493 THAP7-AS1
GH22J020503 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +8.4 8435 1.6 NFIB ZIC2 PRDM10 ZNF629 ZNF740 CHD2 JUN RCOR1 JUND SP1 MED15 ZNF74 piR-41245-161 LOC101928824
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928824 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928824 Gene

Genomic Locations for LOC101928824 Gene
chr22:20,495,966-20,500,835
(GRCh38/hg38)
Size:
4,870 bases
Orientation:
Plus strand

Genomic View for LOC101928824 Gene

Genes around LOC101928824 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928824 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC101928824 Gene

Proteins for LOC101928824 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC101928824 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928824 Gene

Domains & Families for LOC101928824 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928824 Gene

Function for LOC101928824 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928824 Gene

Localization for LOC101928824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928824 Gene

Pathways & Interactions for LOC101928824 Gene

PathCards logo

SuperPathways for LOC101928824 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928824 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928824 Gene

Drugs & Compounds for LOC101928824 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC101928824 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928824 Gene

No ASD Table

Relevant External Links for LOC101928824 Gene

GeneLoc Exon Structure for
LOC101928824

No data available for mRNA/cDNA for LOC101928824 Gene

Expression for LOC101928824 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928824 Gene

Orthologs for LOC101928824 Gene

No data available for Orthologs and Evolution for LOC101928824 Gene

Paralogs for LOC101928824 Gene

No data available for Paralogs for LOC101928824 Gene

Variants for LOC101928824 Gene

Sequence variations from dbSNP and Humsavar for LOC101928824 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000373963 -- 20,494,677(+) C/T upstream_transcript_variant
rs1000388915 -- 20,494,930(+) A/C/G upstream_transcript_variant
rs1000479045 -- 20,499,941(+) T/C intron_variant
rs1000788138 -- 20,494,271(+) G/A upstream_transcript_variant
rs1001511185 -- 20,500,397(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928824 Gene

Disorders for LOC101928824 Gene

No disorders were found for LOC101928824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928824 Gene

Publications for LOC101928824 Gene

No publications were found for LOC101928824 Gene.

No data available for External Links for LOC101928824 Gene

Products for LOC101928824 Gene

Sources for LOC101928824 Gene