LOC101928743 Gene (RNA Gene)

Uncharacterized LOC101928743

GC06M029250
GIFtS:
5
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Aliases for LOC101928743 Gene

Data sources for LOC101928743 Gene:

Subcategory (RNA class) for LOC101928743 Gene

lncRNA

Aliases for LOC101928743 Gene

External Ids for LOC101928743 Gene

Previous GeneCards Identifiers for LOC101928743 Gene

  • GC06U902337
  • GC06M026455
  • GC06M026478
  • GC06M026766
  • GC06M026812
  • GC06M026870
  • GC06M027086
  • GC06M026496
  • GC06M026515
  • GC06M026541
  • GC06M026577
  • GC06M026607
  • GC06M026650
  • GC06M026688
  • GC06M026725
  • GC06M027362

Summaries for LOC101928743 Gene

GeneCards Summary for LOC101928743 Gene

LOC101928743 (Uncharacterized LOC101928743) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928743 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928743 Gene

Genomics for LOC101928743 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC101928743 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J026327 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.3 2336 6.4 ZSCAN16 TBP ZBTB10 MXD4 FEZF1 CEBPA MNT DEK IKZF1 SMAD5 LOC107986582 lnc-BTN3A2-1 TRR-ACG1-1 TRW-CCA3-2 TRX-CAT1-4 piR-30961-004 piR-33437-005 piR-41435-002 BTN3A2 H4C8
GH06J026335 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 -4.4 -4361 2.2 TBP MNT IKZF1 IRF2 MBD2 BHLHE40 CEBPB ARNT NFATC3 ZNF740 BTN3A2 ABT1 H4C8 BTN2A1 HMGN4 BTN2A2 BTN1A1 H2AC10P LARP1P1 LOC101928743
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928743 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928743 Gene

Latest Assembly
chr6:26,324,661-26,332,137
(GRCh38/hg38)
Size:
7,477 bases
Orientation:
Minus strand

Genomic View for LOC101928743 Gene

Genes around LOC101928743 on UCSC Golden Path with GeneCards custom track
LOC101928743 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101928743 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928743 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC101928743 Gene

Proteins for LOC101928743 Gene

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Post-translational modifications for LOC101928743 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928743 Gene

Domains & Families for LOC101928743 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928743 Gene

Function for LOC101928743 Gene

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  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928743 Gene

Localization for LOC101928743 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928743 Gene

Pathways & Interactions for LOC101928743 Gene

PathCards logo

SuperPathways for LOC101928743 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928743 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928743 Gene

Drugs & Compounds for LOC101928743 Gene

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No Compound Related Data Available

Transcripts for LOC101928743 Gene

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  3. Inhibitory RNAs for research
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Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928743 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF1A2E_9606 lncRNA 711 1

Ensembl: ENST00000655687 (view in UCSC) ,

URS00008BA49F_9606 lncRNA 811 3

LncBook: HSALNT0102882,

LNCipedia: lnc-HIST1H4H-3:1,

NONCODE: NONHSAT108263.2,

URS00009AF86B_9606 lncRNA 286 2

LncBook: HSALNT0102884,

NONCODE: NONHSAT208908.1,

URS0001BF15E6_9606 lncRNA 811 1

LncBook: HSALNT0102882,

URS0001BF0468_9606 lncRNA 598 1

LncBook: HSALNT0102881,

LOC101928743 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928743 Gene

No ASD Table

Relevant External Links for LOC101928743 Gene

GeneLoc Exon Structure for
LOC101928743

No data available for mRNA/cDNA for LOC101928743 Gene

Expression for LOC101928743 Gene

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Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928743

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928743 Gene

Orthologs for LOC101928743 Gene

Evolution for LOC101928743 Gene

ENSEMBL:
Gene Tree for LOC101928743 (if available)
TreeFam:
Gene Tree for LOC101928743 (if available)

No data available for Orthologs for LOC101928743 Gene

Paralogs for LOC101928743 Gene

No data available for Paralogs for LOC101928743 Gene

Variants for LOC101928743 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101928743 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928743 Gene

Disorders for LOC101928743 Gene

No disorders were found for LOC101928743 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928743 Gene

Publications for LOC101928743 Gene

No publications were found for LOC101928743 Gene.

No data available for Mastermind for LOC101928743 Gene

Products for LOC101928743 Gene

Sources for LOC101928743 Gene