Aliases for LOC101928708 Gene

Subcategory (RNA class) for LOC101928708 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for LOC101928708 Gene

  • Uncharacterized LOC101928708 3
  • Lnc-MAP1LC3B-3 170
  • NONHSAG020238 94
  • HSALNG0113364 169

External Ids for LOC101928708 Gene

Previous GeneCards Identifiers for LOC101928708 Gene

  • GC16U901524

Summaries for LOC101928708 Gene

GeneCards Summary for LOC101928708 Gene

LOC101928708 (Uncharacterized LOC101928708) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928708 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928708 Gene

Genomics for LOC101928708 Gene

GeneHancer (GH) Regulatory Elements for LOC101928708 Gene

Promoters and enhancers for LOC101928708 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928708 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928708 Gene

Genomic Locations for LOC101928708 Gene
chr16:87,212,115-87,226,430
(GRCh38/hg38)
Size:
14,316 bases
Orientation:
Plus strand

Genomic View for LOC101928708 Gene

Genes around LOC101928708 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928708 Gene

Proteins for LOC101928708 Gene

Post-translational modifications for LOC101928708 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928708 Gene

Domains & Families for LOC101928708 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928708 Gene

Function for LOC101928708 Gene

Phenotypes From GWAS Catalog for LOC101928708 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928708 Gene

Localization for LOC101928708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928708 Gene

Pathways & Interactions for LOC101928708 Gene

PathCards logo

SuperPathways for LOC101928708 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928708 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928708 Gene

Drugs & Compounds for LOC101928708 Gene

No Compound Related Data Available

Transcripts for LOC101928708 Gene

mRNA/cDNA for LOC101928708 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(4) RNACentral transcripts :
(4) LNCipedia transcripts :
(1) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928708 Gene

No ASD Table

Relevant External Links for LOC101928708 Gene

GeneLoc Exon Structure for
LOC101928708

Expression for LOC101928708 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928708 Gene

genes like me logo Genes that share expression patterns with LOC101928708: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928708 Gene

Orthologs for LOC101928708 Gene

No data available for Orthologs and Evolution for LOC101928708 Gene

Paralogs for LOC101928708 Gene

No data available for Paralogs for LOC101928708 Gene

Variants for LOC101928708 Gene

Sequence variations from dbSNP and Humsavar for LOC101928708 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000192328 -- 87,221,836(+) A/G intron_variant
rs1000436520 -- 87,222,869(+) A/G intron_variant
rs1000458579 -- 87,217,058(+) C/T intron_variant
rs1000627966 -- 87,222,553(+) CATCATCA/CATCA intron_variant
rs1000874198 -- 87,216,850(+) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928708 Gene

Variant ID Type Subtype PubMed ID
dgv1374n106 CNV deletion 24896259
esv2665779 CNV deletion 23128226
esv2671904 CNV deletion 23128226
esv2714914 CNV deletion 23290073
esv2714915 CNV deletion 23290073
esv2714916 CNV deletion 23290073
esv2714919 CNV deletion 23290073
esv2714920 CNV deletion 23290073
esv2714921 CNV deletion 23290073
esv29867 CNV loss 19812545
esv3639505 CNV loss 21293372
nsv103390 CNV deletion 16902084
nsv1062525 CNV gain 25217958
nsv827800 CNV loss 20364138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101928708 Gene

Disorders for LOC101928708 Gene

No disorders were found for LOC101928708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928708 Gene

Publications for LOC101928708 Gene

No publications were found for LOC101928708 Gene.

No data available for External Links for LOC101928708 Gene

Products for LOC101928708 Gene

Sources for LOC101928708 Gene