Aliases for LOC101928659 Gene

Subcategory (RNA class) for LOC101928659 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for LOC101928659 Gene

  • Uncharacterized LOC101928659 3
  • Novel Transcript, Antisense To FBXO31 And C16orf95 Readthrough 5
  • NONHSAG020243.2 91
  • Lnc-MAP1LC3B-1 165
  • AC010531.6 5

External Ids for LOC101928659 Gene

Previous GeneCards Identifiers for LOC101928659 Gene

  • GC16U901623

Summaries for LOC101928659 Gene

GeneCards Summary for LOC101928659 Gene

LOC101928659 (Uncharacterized LOC101928659) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for LOC101928659 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for LOC101928659 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for LOC101928659 Gene

Genomics for LOC101928659 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928659 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928659 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928659 Gene

Genomic Locations for LOC101928659 Gene
chr16:87,317,422-87,325,351
(GRCh38/hg38)
Size:
7,930 bases
Orientation:
Plus strand
chr16:87,351,115-87,351,643
(GRCh37/hg19)
Size:
529 bases
Orientation:
Plus strand

Genomic View for LOC101928659 Gene

Genes around LOC101928659 on UCSC Golden Path with GeneCards custom track
LOC101928659 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101928659 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928659 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928659 Gene

Proteins for LOC101928659 Gene

Post-translational modifications for LOC101928659 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928659 Gene

Domains & Families for LOC101928659 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928659 Gene

Function for LOC101928659 Gene

Phenotypes From GWAS Catalog for LOC101928659 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928659 Gene

Localization for LOC101928659 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928659 Gene

Pathways & Interactions for LOC101928659 Gene

PathCards logo

SuperPathways for LOC101928659 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928659 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928659 Gene

Drugs & Compounds for LOC101928659 Gene

No Compound Related Data Available

Transcripts for LOC101928659 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928659 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000784209_9606 lncRNA 401 3

RefSeq: NR_135180,

Ensembl: ENST00000602282 (view in UCSC) ,

LNCipedia: lnc-MAP1LC3B-1:5,

URS00008BE96E_9606 lncRNA 1381 2

LNCipedia: lnc-MAP1LC3B-1:3,

NONCODE: NONHSAT144273.2,

URS00008B84A9_9606 lncRNA 396 2

LNCipedia: lnc-MAP1LC3B-1:1,

NONCODE: NONHSAT144275.2,

URS00008B3A38_9606 lncRNA 349 2

LNCipedia: lnc-MAP1LC3B-1:2,

NONCODE: NONHSAT144274.2,

URS0000D56DBB_9606 lncRNA 7722 1

LNCipedia: lnc-MAP1LC3B-1:10,

LOC101928659 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928659 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928659 Gene

No ASD Table

Relevant External Links for LOC101928659 Gene

GeneLoc Exon Structure for
LOC101928659

Expression for LOC101928659 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101928659 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101928659 Gene

This gene is overexpressed in Pituitary (x4.6).
genes like me logo Genes that share expression patterns with LOC101928659: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928659 Gene

Orthologs for LOC101928659 Gene

Evolution for LOC101928659 Gene

ENSEMBL:
Gene Tree for LOC101928659 (if available)
TreeFam:
Gene Tree for LOC101928659 (if available)

No data available for Orthologs for LOC101928659 Gene

Paralogs for LOC101928659 Gene

No data available for Paralogs for LOC101928659 Gene

Variants for LOC101928659 Gene

Additional dbSNP identifiers (rs#s) for LOC101928659 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928659 Gene

Disorders for LOC101928659 Gene

No disorders were found for LOC101928659 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928659 Gene

Publications for LOC101928659 Gene

  1. Expressed sequence tag analysis of human retina for the NEIBank Project: retbindin, an abundant, novel retinal cDNA and alternative splicing of other retina-preferred gene transcripts. (PMID: 12107411) Wistow G … Peterson K (Molecular vision 2002) 3

No data available for Mastermind for LOC101928659 Gene

Products for LOC101928659 Gene

Sources for LOC101928659 Gene