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Aliases for LOC101928651 Gene

Subcategory (RNA class) for LOC101928651 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101928651 Gene

  • Uncharacterized LOC101928651 3
  • AC026746.1 5

External Ids for LOC101928651 Gene

Previous GeneCards Identifiers for LOC101928651 Gene

  • GC05U901896

Summaries for LOC101928651 Gene

GeneCards Summary for LOC101928651 Gene

LOC101928651 (Uncharacterized LOC101928651) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928651 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928651 Gene

Genomics for LOC101928651 Gene

GeneHancer (GH) Regulatory Elements for LOC101928651 Gene

Promoters and enhancers for LOC101928651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I061866 Enhancer 0.9 Ensembl ENCODE 10.5 -168.6 -168620 0.7 MEIS2 ZBTB21 ZNF133 JUN ZNF266 CEBPG BATF ZKSCAN1 FOSL1 ZNF316 LOC101928651 LRRC70 ENSG00000248199 LOC643307
GH05I061736 Enhancer 0.7 FANTOM5 ENCODE 11.4 -38.7 -38687 1.1 MXI1 RFX1 POLR2A FOXP2 GC05P061738 C5orf64-AS1 LOC101928651 C5orf64
GH05I061631 Enhancer 0.7 Ensembl ENCODE dbSUPER 9.5 +66.5 66531 1.4 ZMYM3 LOC105378997 RNU6-913P LOC101928651 C5orf64
GH05I061731 Enhancer 0.5 ENCODE 11.5 -33.5 -33463 1.3 RXRA GATAD2B RAD21 PRDM1 NR2F2 LOC101928651 C5orf64-AS1 C5orf64
GH05I061647 Enhancer 0.3 dbSUPER 10.5 +48.9 48850 3.2 CTCF LOC101928651 SMIM15 SMIM15-AS1 C5orf64 HSPD1P22
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928651 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928651 Gene

Genomic Locations for LOC101928651 Gene
chr5:61,658,474-61,698,432
(GRCh38/hg38)
Size:
39,959 bases
Orientation:
Minus strand
chr5:60,954,301-60,994,259
(GRCh37/hg19)

Genomic View for LOC101928651 Gene

Genes around LOC101928651 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928651 Gene

Proteins for LOC101928651 Gene

Post-translational modifications for LOC101928651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928651 Gene

Domains & Families for LOC101928651 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928651 Gene

Function for LOC101928651 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928651 Gene

Localization for LOC101928651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928651 Gene

Pathways & Interactions for LOC101928651 Gene

SuperPathways for LOC101928651 Gene

No Data Available

Interacting Proteins for LOC101928651 Gene

Gene Ontology (GO) - Biological Process for LOC101928651 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928651 Gene

Drugs & Compounds for LOC101928651 Gene

No Compound Related Data Available

Transcripts for LOC101928651 Gene

mRNA/cDNA for LOC101928651 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928651 Gene

No ASD Table

Relevant External Links for LOC101928651 Gene

GeneLoc Exon Structure for
LOC101928651

Expression for LOC101928651 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928651 Gene

genes like me logo Genes that share expression patterns with LOC101928651: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928651 Gene

Orthologs for LOC101928651 Gene

Evolution for LOC101928651 Gene

ENSEMBL:
Gene Tree for LOC101928651 (if available)
TreeFam:
Gene Tree for LOC101928651 (if available)

No data available for Orthologs for LOC101928651 Gene

Paralogs for LOC101928651 Gene

No data available for Paralogs for LOC101928651 Gene

Variants for LOC101928651 Gene

Sequence variations from dbSNP and Humsavar for LOC101928651 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000061363 -- 61,669,793(-) C/T intron_variant
rs1000068335 -- 61,665,316(-) G/A intron_variant
rs1000106470 -- 61,690,107(-) C/T intron_variant
rs1000218422 -- 61,675,439(-) C/T intron_variant
rs1000239892 -- 61,674,473(-) G/A/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928651 Gene

Variant ID Type Subtype PubMed ID
esv2671982 CNV deletion 23128226
esv3605219 CNV loss 21293372
esv3605221 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101928651 Gene

Disorders for LOC101928651 Gene

Additional Disease Information for LOC101928651

No disorders were found for LOC101928651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928651 Gene

Publications for LOC101928651 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC101928651 Gene

Sources for LOC101928651 Gene

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