Aliases for LOC101928618 Gene

Subcategory (RNA class) for LOC101928618 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for LOC101928618 Gene

  • Uncharacterized LOC101928618 3

External Ids for LOC101928618 Gene

Previous GeneCards Identifiers for LOC101928618 Gene

  • GC07U903681

Summaries for LOC101928618 Gene

GeneCards Summary for LOC101928618 Gene

LOC101928618 (Uncharacterized LOC101928618) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928618 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928618 Gene

Genomics for LOC101928618 Gene

GeneHancer (GH) Regulatory Elements for LOC101928618 Gene

Promoters and enhancers for LOC101928618 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J036096 Enhancer 0.4 Ensembl 750.6 +1.4 1391 0.6 RAD21 CTCF RARA ENSG00000261184 LOC101928618 HSALNG0057246
GH07J036103 Enhancer 0.5 Ensembl 0.4 +8.9 8891 0.8 RUNX3 BCOR KDM1A ZMYM3 SMARCA5 ENSG00000261184 HSALNG0057246 LOC101928618
GH07J036106 Enhancer 0.5 Ensembl 0.4 +12.2 12191 0.2 RXRA SP1 NR2F2 ATF3 HNF4A HSALNG0057246 LOC101928618
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928618 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928618 Gene

Genomic Locations for LOC101928618 Gene
chr7:36,095,310-36,100,653
(GRCh38/hg38)
Size:
5,344 bases
Orientation:
Plus strand
chr7:36,134,882-36,140,263
(GRCh37/hg19)
Size:
5,382 bases
Orientation:
Plus strand

Genomic View for LOC101928618 Gene

Genes around LOC101928618 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928618 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928618 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928618 Gene

Proteins for LOC101928618 Gene

Post-translational modifications for LOC101928618 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928618 Gene

Domains & Families for LOC101928618 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928618 Gene

Function for LOC101928618 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928618 Gene

Localization for LOC101928618 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928618 Gene

Pathways & Interactions for LOC101928618 Gene

PathCards logo

SuperPathways for LOC101928618 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928618 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928618 Gene

Drugs & Compounds for LOC101928618 Gene

No Compound Related Data Available

Transcripts for LOC101928618 Gene

mRNA/cDNA for LOC101928618 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) RNACentral transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928618 Gene

No ASD Table

Relevant External Links for LOC101928618 Gene

GeneLoc Exon Structure for
LOC101928618

Expression for LOC101928618 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928618 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101928618 Gene

This gene is overexpressed in Testis (x51.9).
genes like me logo Genes that share expression patterns with LOC101928618: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928618 Gene

Orthologs for LOC101928618 Gene

No data available for Orthologs and Evolution for LOC101928618 Gene

Paralogs for LOC101928618 Gene

No data available for Paralogs for LOC101928618 Gene

Variants for LOC101928618 Gene

Sequence variations from dbSNP and Humsavar for LOC101928618 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000041376 -- 36,100,451(+) G/A non_coding_transcript_variant
rs1000196298 -- 36,101,100(+) C/T downstream_transcript_variant
rs1000315548 -- 36,095,091(+) C/T upstream_transcript_variant
rs1000759290 -- 36,100,681(+) G/A downstream_transcript_variant
rs1000802756 -- 36,099,269(+) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101928618 Gene

Variant ID Type Subtype PubMed ID
nsv830955 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101928618 Gene

Disorders for LOC101928618 Gene

No disorders were found for LOC101928618 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928618 Gene

Publications for LOC101928618 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 56

No data available for External Links for LOC101928618 Gene

Products for LOC101928618 Gene

Sources for LOC101928618 Gene