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LOC101928590 (Uncharacterized LOC101928590) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH04J175786 | Enhancer | 0.2 | Ensembl | 250.7 | -1.7 | -1705 | 4.4 | HSALNG0038686 LOC101928590 GPM6A ADAM29 | ||
GH04J175792 | Enhancer | 0.2 | Ensembl | 250.7 | +1.0 | 995 | 0.2 | LOC101928590 lnc-SPATA4-2 GPM6A ADAM29 | ||
GH04J175813 | Promoter/Enhancer | 1.2 | EPDnew Ensembl ENCODE | 7.3 | +21.2 | 21195 | 5 | BCL11A CHD1 ATF2 ZSCAN4 ATF7 POLR2A PRDM10 RAD21 | lnc-SPATA4-2 GPM6A LOC101928590 SPCS3-AS1 ADAM29 | |
GH04J175833 | Enhancer | 0.3 | Ensembl | 0.3 | +44.1 | 44095 | 1.6 | FOS | lnc-SPATA4-2 LOC101928590 ENSG00000248249 GPM6A | |
GH04J175816 | Enhancer | 0.2 | FANTOM5 | 0.3 | +26.5 | 26452 | 0.2 | lnc-SPATA4-2 LOC101928590 ENSG00000248249 GPM6A ADAM29 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00000B5C51_9606 | lncRNA | 1213 | 4 |
RefSeq: NR_125901, Ensembl: ENST00000514864 (view in UCSC) , LNCipedia: lnc-WDR17-1:1, NONCODE: NONHSAT099345.2, |
URS00008BCF0C_9606 | lncRNA | 658 | 3 |
LncBook: HSALNT0081223, LNCipedia: lnc-WDR17-1:2, NONCODE: NONHSAT099346.2, |
URS00009BDDD3_9606 | lncRNA | 1547 | 2 |
LncBook: HSALNT0081220, NONCODE: NONHSAT199434.1, |
URS00009B5422_9606 | lncRNA | 219 | 2 |
LncBook: HSALNT0081230, NONCODE: NONHSAT199435.1, |
URS0001BF4712_9606 | lncRNA | 4502 | 1 |
LncBook: HSALNT0081224, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3569837 | CNV | loss | 25503493 |
esv3603268 | CNV | gain | 21293372 |
esv3603269 | CNV | gain | 21293372 |
No disorders were found for LOC101928590 Gene.
No publications were found for LOC101928590 Gene.