Aliases for LOC101928475 Gene

Subcategory (RNA class) for LOC101928475 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101928475 Gene

  • Uncharacterized LOC101928475 3 5
  • Lnc-ZNF286A-51 168
  • HSALNG0114753 167
  • NONHSAG020899 92
  • AC005772.1 5

External Ids for LOC101928475 Gene

Previous GeneCards Identifiers for LOC101928475 Gene

  • GC17U901911
  • GC17P014919

Summaries for LOC101928475 Gene

GeneCards Summary for LOC101928475 Gene

LOC101928475 (Uncharacterized LOC101928475) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928475 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928475 Gene

Genomics for LOC101928475 Gene

GeneHancer (GH) Regulatory Elements for LOC101928475 Gene

Promoters and enhancers for LOC101928475 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J015023 Enhancer 0.4 Ensembl 0.4 +9.1 9111 0.6 NFE2 ZNF148 BACH1 HMBOX1 CDRT7 LOC101928475
GH17J015048 Enhancer 0.6 Ensembl ENCODE 0.3 +34.7 34660 2.7 CTCF SIN3A RAD21 UBE2SP1 CDRT7 LOC101928475 ENSG00000287307
GH17J015031 Enhancer 0.4 Ensembl 0.4 +17.2 17211 1.2 TEAD4 RNF2 CBX8 EZH2 CDRT7 LOC101928475 ENSG00000287307
GH17J015038 Enhancer 0.4 Ensembl ENCODE 0.4 +24.5 24511 1 FOS CDRT8 CDRT7 LOC101928475 ENSG00000287307
GH17J015036 Enhancer 0.3 ENCODE 0.4 +21.8 21759 0.9 YY1 CDRT7 LOC101928475 ENSG00000287307
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928475 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928475 Gene

Genomic Locations for LOC101928475 Gene
chr17:15,014,790-15,052,277
(GRCh38/hg38)
Size:
37,488 bases
Orientation:
Plus strand
chr17:14,918,122-14,955,593
(GRCh37/hg19)
Size:
37,472 bases
Orientation:
Plus strand

Genomic View for LOC101928475 Gene

Genes around LOC101928475 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928475 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928475 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928475 Gene

Proteins for LOC101928475 Gene

Post-translational modifications for LOC101928475 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928475 Gene

Domains & Families for LOC101928475 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928475 Gene

Function for LOC101928475 Gene

Phenotypes From GWAS Catalog for LOC101928475 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928475 Gene

Localization for LOC101928475 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928475 Gene

Pathways & Interactions for LOC101928475 Gene

PathCards logo

SuperPathways for LOC101928475 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101928475 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928475 Gene

Drugs & Compounds for LOC101928475 Gene

No Compound Related Data Available

Transcripts for LOC101928475 Gene

mRNA/cDNA for LOC101928475 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928475 Gene

No ASD Table

Relevant External Links for LOC101928475 Gene

GeneLoc Exon Structure for
LOC101928475

Expression for LOC101928475 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101928475 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101928475 Gene

This gene is overexpressed in Testis (x53.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928475

genes like me logo Genes that share expression patterns with LOC101928475: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928475 Gene

Orthologs for LOC101928475 Gene

Evolution for LOC101928475 Gene

ENSEMBL:
Gene Tree for LOC101928475 (if available)
TreeFam:
Gene Tree for LOC101928475 (if available)

No data available for Orthologs for LOC101928475 Gene

Paralogs for LOC101928475 Gene

No data available for Paralogs for LOC101928475 Gene

Variants for LOC101928475 Gene

Additional dbSNP identifiers (rs#s) for LOC101928475 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928475 Gene

Disorders for LOC101928475 Gene

No disorders were found for LOC101928475 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928475 Gene

Publications for LOC101928475 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC101928475 Gene

Products for LOC101928475 Gene

Sources for LOC101928475 Gene