Aliases for LOC101928447 Gene

Subcategory (RNA class) for LOC101928447 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928447 Gene

  • Uncharacterized LOC101928447 3

External Ids for LOC101928447 Gene

Previous GeneCards Identifiers for LOC101928447 Gene

  • GC17U901904

Summaries for LOC101928447 Gene

GeneCards Summary for LOC101928447 Gene

LOC101928447 (Uncharacterized LOC101928447) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928447 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928447 Gene

Genomics for LOC101928447 Gene

GeneHancer (GH) Regulatory Elements for LOC101928447 Gene

Promoters and enhancers for LOC101928447 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J076131 Enhancer 1.1 FANTOM5 ENCODE 750.6 +0.0 36 1.7 RERE ELF3 CEBPG TFE3 SP7 PPARG HNF1A SP5 KAT8 GLIS2 LOC101928447 FOXJ1 RNF157-AS1 RECQL5 EXOC7
GH17J076133 Enhancer 0.8 ENCODE 750.6 -1.3 -1336 0.2 NR2F1 NR2F6 MIXL1 HLF ELF3 TFE3 CEBPG SP5 KAT8 CEBPA LOC101928447 piR-45710
GH17J076120 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 0.4 +10.7 10708 2 GTF3C2 ZNF24 ZBTB40 CTCF SMARCE1 L3MBTL2 RAD21 POU5F1 NKRF GTF2F1 EXOC7 lnc-FOXJ1-1 SRSF2 NT5C UNK NUP85 MFSD11 ENSG00000266980 METTL23 GGA3
GH17J076134 Promoter/Enhancer 0.9 Ensembl ENCODE 0.6 -2.9 -2905 1.2 NFIB SP1 ZBTB20 EZH2 NFIC ZFP64 SIN3A GLIS1 LOC101928447 piR-45710
GH17J076119 Enhancer 0.8 Ensembl 0.4 +12.9 12898 0.4 MLX RBPJ NR2F1 NR2F6 ZNF652 ELF3 AHR TFE3 PPARG SP5 EXOC7 lnc-FOXJ1-1 FOXJ1 LOC101928447 lnc-ZACN-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928447 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928447 Gene

Genomic Locations for LOC101928447 Gene
chr17:76,105,974-76,132,499
(GRCh38/hg38)
Size:
26,526 bases
Orientation:
Minus strand

Genomic View for LOC101928447 Gene

Genes around LOC101928447 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928447 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928447 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928447 Gene

Proteins for LOC101928447 Gene

Post-translational modifications for LOC101928447 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928447 Gene

Domains & Families for LOC101928447 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928447 Gene

Function for LOC101928447 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928447 Gene

Localization for LOC101928447 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928447 Gene

Pathways & Interactions for LOC101928447 Gene

PathCards logo

SuperPathways for LOC101928447 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928447 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928447 Gene

Drugs & Compounds for LOC101928447 Gene

No Compound Related Data Available

Transcripts for LOC101928447 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928447 Gene

No ASD Table

Relevant External Links for LOC101928447 Gene

GeneLoc Exon Structure for
LOC101928447

No data available for mRNA/cDNA for LOC101928447 Gene

Expression for LOC101928447 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928447 Gene

Orthologs for LOC101928447 Gene

No data available for Orthologs and Evolution for LOC101928447 Gene

Paralogs for LOC101928447 Gene

No data available for Paralogs for LOC101928447 Gene

Variants for LOC101928447 Gene

Sequence variations from dbSNP and Humsavar for LOC101928447 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000672539 -- 76,122,698(-) G/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000690044 -- 76,129,638(-) A/C genic_upstream_transcript_variant, intron_variant
rs1000865987 -- 76,128,141(-) G/A genic_upstream_transcript_variant, intron_variant
rs1000932272 -- 76,134,065(-) T/C upstream_transcript_variant
rs1000958673 -- 76,128,005(-) C/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928447 Gene

Disorders for LOC101928447 Gene

No disorders were found for LOC101928447 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928447 Gene

Publications for LOC101928447 Gene

No publications were found for LOC101928447 Gene.

No data available for External Links for LOC101928447 Gene

Products for LOC101928447 Gene

Sources for LOC101928447 Gene