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LOC101928417 (Uncharacterized LOC101928417) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH16J082992 | Enhancer | 0.2 | Ensembl | 250.7 | -0.4 | -403 | 0.2 | LOC101928417 CDH13 piR-50444-157 HSBP1 | ||
GH16J082990 | Enhancer | 1 | FANTOM5 Ensembl ENCODE | 0.7 | -3.6 | -3637 | 6.1 | ZNF513 MAFF JUND ZNF316 SPI1 YBX1 MAFK MAFG LARP7 CREB1 | ENSG00000259914 CDH13 LOC101928417 piR-50444-157 HSBP1 | |
GH16J083002 | Enhancer | 0.3 | Ensembl | 0.4 | -12.7 | -12703 | 3.6 | NFE2 NFE2L2 | CDH13 MPHOSPH6 LOC101928417 piR-50444-157 HSBP1 | |
GH16J082943 | Enhancer | 0.6 | Ensembl ENCODE | 0.3 | +45.1 | 45098 | 3.2 | MAX CEBPB NR2F2 | piR-35674-200 LOC101928417 CDH13 HSBP1 | |
GH16J082936 | Enhancer | 0.6 | Ensembl ENCODE | 0.2 | +53.1 | 53097 | 2.8 | MAFK BHLHE40 NFE2L2 FOS | piR-35674-200 LOC101928417 CDH13 HSBP1 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000510713_9606 | lncRNA | 1496 | 5 |
RefSeq: NR_110937, Ensembl: ENST00000565238 (view in UCSC) , LncBook: HSALNT0234372, LNCipedia: lnc-MPHOSPH6-3:1, NONCODE: NONHSAT143997.2, |
URS0001BDE932_9606 | lncRNA | 1493 | 1 |
LncBook: HSALNT0234372, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv3051n100 | CNV | gain | 25217958 |
dgv3052n100 | CNV | loss | 25217958 |
dgv5253n54 | CNV | gain | 21841781 |
dgv5255n54 | CNV | loss | 21841781 |
esv22422 | CNV | loss | 19812545 |
esv2670466 | CNV | deletion | 23128226 |
esv2714802 | CNV | deletion | 23290073 |
esv3553776 | CNV | deletion | 23714750 |
esv3582395 | CNV | loss | 25503493 |
esv3892918 | CNV | loss | 25118596 |
nsv1061288 | CNV | gain+loss | 25217958 |
nsv1070360 | CNV | deletion | 25765185 |
nsv1109026 | CNV | deletion | 24896259 |
nsv522570 | CNV | loss | 19592680 |
nsv573367 | CNV | gain | 21841781 |
nsv573371 | CNV | loss | 21841781 |
No disorders were found for LOC101928417 Gene.
No publications were found for LOC101928417 Gene.