Aliases for LOC101928391 Gene

Subcategory (RNA class) for LOC101928391 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928391 Gene

  • Uncharacterized LOC101928391 3

External Ids for LOC101928391 Gene

Previous GeneCards Identifiers for LOC101928391 Gene

  • GC01U903701
  • GC01P027046

Summaries for LOC101928391 Gene

GeneCards Summary for LOC101928391 Gene

LOC101928391 (Uncharacterized LOC101928391) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928391 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928391 Gene

Genomics for LOC101928391 Gene

GeneHancer (GH) Regulatory Elements for LOC101928391 Gene

Promoters and enhancers for LOC101928391 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J027030 Enhancer 1 ENCODE CraniofacialAtlas dbSUPER 750.6 -0.1 -80 1.7 ZNF362 MNT SP1 ZFX POLR2A EZH2 HDAC2 BCOR ZFHX2 CBX1 LOC101928391 ZDHHC18 FGR TENT5B
GH01J027032 Enhancer 0.3 ENCODE 750.6 +1.9 1882 1.5 ZBTB8A ZFX FJ601684-012 LOC101928391 TENT5B ZDHHC18
GH01J027026 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.6 -4.2 -4157 2.2 ZBTB40 SMARCE1 CREB1 L3MBTL2 DACH1 TEAD4 GTF2F1 ELF3 ZFX MLLT1 ARID1A ACTG1P20 HMGN2 FAM76A GPN2 ENSG00000225891 MAP3K6 NPM1P39 ENSG00000260063 ENSG00000231344
GH01J027045 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 +14.4 14403 0.3 CTCF RBPJ SMARCE1 NR2F6 MYC CC2D1A RBM39 L3MBTL2 RAD21 MAX HMGN2 ZNF593 ARID1A ACTG1P20 PPP1R8 TENT5B FAM76A AHDC1 ENSG00000223583 GPN2
GH01J027044 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.4 +13.1 13115 1.4 CTCF RUNX1 CC2D1A RAD21 POU5F1 ARID2 REST TRIM22 ZNF143 ZEB2 TENT5B ZDHHC18 UBXN11 lnc-TRNP1-1 lnc-TRNP1-4 LOC101928391
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928391 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928391 Gene

Genomic Locations for LOC101928391 Gene
chr1:27,031,757-27,063,997
(GRCh38/hg38)
Size:
32,241 bases
Orientation:
Plus strand

Genomic View for LOC101928391 Gene

Genes around LOC101928391 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928391 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928391 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928391 Gene

Proteins for LOC101928391 Gene

Post-translational modifications for LOC101928391 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928391 Gene

Domains & Families for LOC101928391 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928391 Gene

Function for LOC101928391 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928391 Gene

Localization for LOC101928391 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928391 Gene

Pathways & Interactions for LOC101928391 Gene

PathCards logo

SuperPathways for LOC101928391 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928391 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928391 Gene

Drugs & Compounds for LOC101928391 Gene

No Compound Related Data Available

Transcripts for LOC101928391 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928391 Gene

No ASD Table

Relevant External Links for LOC101928391 Gene

GeneLoc Exon Structure for
LOC101928391

No data available for mRNA/cDNA for LOC101928391 Gene

Expression for LOC101928391 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928391 Gene

Orthologs for LOC101928391 Gene

No data available for Orthologs and Evolution for LOC101928391 Gene

Paralogs for LOC101928391 Gene

No data available for Paralogs for LOC101928391 Gene

Variants for LOC101928391 Gene

Sequence variations from dbSNP and Humsavar for LOC101928391 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000046478 -- 27,059,588(+) G/A intron_variant
rs1000242669 -- 27,032,496(+) G/A genic_upstream_transcript_variant, intron_variant
rs1000291589 -- 27,037,297(+) T/C genic_upstream_transcript_variant, intron_variant
rs1000320226 -- 27,053,909(+) C/T intron_variant
rs1000437659 -- 27,061,705(+) C/T genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928391 Gene

Disorders for LOC101928391 Gene

No disorders were found for LOC101928391 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928391 Gene

Publications for LOC101928391 Gene

No publications were found for LOC101928391 Gene.

No data available for External Links for LOC101928391 Gene

Products for LOC101928391 Gene

Sources for LOC101928391 Gene