Aliases for LOC101928381 Gene

Subcategory (RNA class) for LOC101928381 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LOC101928381 Gene

  • Uncharacterized LOC101928381 3
  • NONHSAG052481.2 91
  • Lnc-FOXD4L4-3 165
  • HSALNG0071276 164

External Ids for LOC101928381 Gene

Previous GeneCards Identifiers for LOC101928381 Gene

  • GC09U901856
  • GC09M070114

Summaries for LOC101928381 Gene

GeneCards Summary for LOC101928381 Gene

LOC101928381 (Uncharacterized LOC101928381) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928381 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928381 Gene

Genomics for LOC101928381 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J065797 Enhancer 0.2 Ensembl 0.4 +6.8 6779 1 ENSG00000237904 piR-37743-012 LOC101928381 FOXD4L4 LOC112267859
GH09J065796 Enhancer 0.2 Ensembl 0.4 +5.4 5380 1 ENSG00000237904 piR-37743-012 LOC101928381 FOXD4L4 LOC112267859
GH09J065775 Enhancer 0.2 Ensembl 0.4 -15.2 -15220 0.6 IGKV1OR-3 lnc-FOXD4L4-1 LOC101928381 FOXD4L4 LOC112267859
GH09J065773 Enhancer 0.2 Ensembl 0.4 -17.2 -17220 2.6 IGKV1OR-3 lnc-FOXD4L4-1 LOC101928381 FOXD4L4 LOC112267859
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928381 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928381 Gene

Genomic Locations for LOC101928381 Gene
chr9:65,791,121-65,802,027
(GRCh38/hg38)
Size:
10,907 bases
Orientation:
Plus strand
chr9:70,113,593-70,124,467
(GRCh37/hg19)
Size:
10,875 bases
Orientation:
Minus strand

Genomic View for LOC101928381 Gene

Genes around LOC101928381 on UCSC Golden Path with GeneCards custom track
LOC101928381 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101928381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928381 Gene

Proteins for LOC101928381 Gene

Post-translational modifications for LOC101928381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928381 Gene

Domains & Families for LOC101928381 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928381 Gene

Function for LOC101928381 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928381 Gene

Localization for LOC101928381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928381 Gene

Pathways & Interactions for LOC101928381 Gene

PathCards logo

SuperPathways for LOC101928381 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928381 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928381 Gene

Drugs & Compounds for LOC101928381 Gene

No Compound Related Data Available

Transcripts for LOC101928381 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928381 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075F123_9606 lncRNA 1263 4

RefSeq: NR_121570,

LncBook: HSALNT0149111,

LNCipedia: lnc-FOXD4L4-3:2,

NONCODE: NONHSAT219571.1,

URS00008C0E2C_9606 lncRNA 399 1

LNCipedia: lnc-FOXD4L4-3:1,

LOC101928381 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928381 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928381 Gene

No ASD Table

Relevant External Links for LOC101928381 Gene

GeneLoc Exon Structure for
LOC101928381

Expression for LOC101928381 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101928381 Gene

genes like me logo Genes that share expression patterns with LOC101928381: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928381 Gene

Orthologs for LOC101928381 Gene

No data available for Orthologs and Evolution for LOC101928381 Gene

Paralogs for LOC101928381 Gene

No data available for Paralogs for LOC101928381 Gene

Variants for LOC101928381 Gene

Additional dbSNP identifiers (rs#s) for LOC101928381 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101928381 Gene

Variant ID Type Subtype PubMed ID
dgv1350e199 CNV deletion 23128226
dgv277n111 CNV duplication 26073780
dgv4418e59 CNV duplication 20981092
dgv7654n100 CNV gain 25217958
dgv7655n100 CNV loss 25217958
dgv7656n100 CNV gain+loss 25217958
dgv7657n100 CNV gain 25217958
dgv7658n100 CNV gain+loss 25217958
dgv7659n100 CNV loss 25217958
dgv7660n100 CNV loss 25217958
esv27382 CNV gain+loss 19812545
esv3392333 CNV duplication 20981092
nsv1021938 CNV gain+loss 25217958
nsv1075643 CNV deletion 25765185
nsv1077150 CNV deletion 25765185
nsv1132730 CNV duplication 24896259
nsv1136049 CNV deletion 24896259
nsv1152414 CNV duplication 26484159
nsv433406 CNV gain 18776910
nsv469514 CNV gain 16826518
nsv508549 CNV deletion 20534489
nsv8516 CNV loss 18304495
nsv951192 CNV deletion 24416366
nsv951503 CNV duplication 24416366
nsv969645 CNV duplication 23825009
nsv969646 CNV duplication 23825009
nsv969647 CNV duplication 23825009
nsv969680 CNV duplication 23825009
nsv969681 CNV duplication 23825009
nsv972342 CNV duplication 23825009
nsv972391 CNV duplication 23825009
nsv972394 CNV duplication 23825009
nsv972743 CNV duplication 23825009
nsv973741 CNV duplication 23825009
nsv982523 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101928381 Gene

Disorders for LOC101928381 Gene

No disorders were found for LOC101928381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928381 Gene

Publications for LOC101928381 Gene

No publications were found for LOC101928381 Gene.

No data available for Mastermind for LOC101928381 Gene

Products for LOC101928381 Gene

Sources for LOC101928381 Gene