Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101928324 Gene

Subcategory (RNA class) for LOC101928324 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101928324 Gene

  • Uncharacterized LOC101928324 3
  • AL513365.2 5

External Ids for LOC101928324 Gene

Previous GeneCards Identifiers for LOC101928324 Gene

  • GC01U903767

Summaries for LOC101928324 Gene

GeneCards Summary for LOC101928324 Gene

LOC101928324 (Uncharacterized LOC101928324) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928324 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928324 Gene

Genomics for LOC101928324 Gene

GeneHancer (GH) Regulatory Elements for LOC101928324 Gene

Promoters and enhancers for LOC101928324 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I026691 Promoter/Enhancer 3.3 UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 37.3 -229.5 -229521 12.9 MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 ARID1A LOC101928728 HMGN2 ACTG1P20 PIGV LOC101928324 GPN2 GPATCH3 TMEM222 RPL17P9
GH01I026121 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 53.2 +342.3 342305 7.7 HDGF PKNOX1 CLOCK SMAD1 ARNT FEZF1 ZNF2 POLR2B ZNF766 ZNF302 ARID1A HMGN2 LOC101928324 ENSG00000261349 TRIM63 SYF2 GPN2 ZNF593 LOC101928728 RPL17P9
GH01I025995 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 38.1 +469.6 469584 4.4 ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 ZNF143 PAFAH2 ARID1A HMGN2 LOC101928324 ENSG00000261349 SYF2 GPN2 ZNF593 LOC101928728 RPL17P9
GH01I026856 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 33.2 -394.2 -394206 9.6 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A ZNF2 YY1 POLR2B ZNF213 SFN ARID1A HMGN2 LOC101928324 GPATCH3 LOC101928728 ACTG1P20 ENSG00000231344 NPM1P39 PIGV
GH01I026274 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 30.1 +183.6 183643 19.1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC MEF2D ZNF610 GLIS1 NBN SH3BGRL3 HMGN2 ARID1A CD52 LOC101928324 NPM1P39 UBXN11 CEP85 GPN2 LIN28A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928324 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928324 Gene

Genomic Locations for LOC101928324 Gene
chr1:26,462,756-26,467,537
(GRCh38/hg38)
Size:
4,782 bases
Orientation:
Minus strand
chr1:26,789,247-26,793,773
(GRCh37/hg19)

Genomic View for LOC101928324 Gene

Genes around LOC101928324 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928324 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928324 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928324 Gene

Proteins for LOC101928324 Gene

Post-translational modifications for LOC101928324 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928324 Gene

Domains & Families for LOC101928324 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928324 Gene

Function for LOC101928324 Gene

Phenotypes From GWAS Catalog for LOC101928324 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928324 Gene

Localization for LOC101928324 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928324 Gene

Pathways & Interactions for LOC101928324 Gene

SuperPathways for LOC101928324 Gene

No Data Available

Interacting Proteins for LOC101928324 Gene

Gene Ontology (GO) - Biological Process for LOC101928324 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928324 Gene

Drugs & Compounds for LOC101928324 Gene

No Compound Related Data Available

Transcripts for LOC101928324 Gene

mRNA/cDNA for LOC101928324 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928324 Gene

No ASD Table

Relevant External Links for LOC101928324 Gene

GeneLoc Exon Structure for
LOC101928324

Expression for LOC101928324 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928324 Gene

genes like me logo Genes that share expression patterns with LOC101928324: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928324 Gene

Orthologs for LOC101928324 Gene

Evolution for LOC101928324 Gene

ENSEMBL:
Gene Tree for LOC101928324 (if available)
TreeFam:
Gene Tree for LOC101928324 (if available)

No data available for Orthologs for LOC101928324 Gene

Paralogs for LOC101928324 Gene

No data available for Paralogs for LOC101928324 Gene

Variants for LOC101928324 Gene

Sequence variations from dbSNP and Humsavar for LOC101928324 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1022655060 uncertain-significance, Retinitis Pigmentosa, Recessive 26,469,305(-) G/T upstream_transcript_variant
rs1057515435 uncertain-significance, Retinitis Pigmentosa, Recessive 26,468,904(-) G/A upstream_transcript_variant
rs1057515436 uncertain-significance, Retinitis Pigmentosa, Recessive 26,469,393(-) GGG/GG upstream_transcript_variant
rs1057515469 uncertain-significance, Retinitis Pigmentosa, Recessive 26,469,443(-) C/T upstream_transcript_variant
rs1057515504 uncertain-significance, Retinitis Pigmentosa, Recessive 26,469,186(-) C/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928324 Gene

Disorders for LOC101928324 Gene

Additional Disease Information for LOC101928324

No disorders were found for LOC101928324 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101928324 Gene

Publications for LOC101928324 Gene

No publications were found for LOC101928324 Gene.

Products for LOC101928324 Gene

Sources for LOC101928324 Gene

Content
Loading form....