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Aliases for LOC101928284 Gene

Subcategory (RNA class) for LOC101928284 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928284 Gene

  • Uncharacterized LOC101928284 3

External Ids for LOC101928284 Gene

Previous GeneCards Identifiers for LOC101928284 Gene

  • GC21U900496
  • GC21M044154

Summaries for LOC101928284 Gene

GeneCards Summary for LOC101928284 Gene

LOC101928284 (Uncharacterized LOC101928284) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928284 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928284 Gene

Genomics for LOC101928284 Gene

GeneHancer (GH) Regulatory Elements for LOC101928284 Gene

Promoters and enhancers for LOC101928284 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J042736 Enhancer 1.1 ENCODE dbSUPER 0.7 +4.4 4351 2.9 ELF3 CEBPG TFE3 SP1 HNF1A PPARG ZNF644 HMG20B RXRA SOX13 ENSG00000225731 PDE9A LOC101928284 LOC105372816
GH21J042745 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.5 -5538 4.5 PRDM10 CEBPA CTCF ZFHX2 ZNF18 RAD21 MAX EGR2 PDE9A LINC00313 PKNOX1 UBASH3A TFF2 PIR31288 LOC101928284
GH21J042732 Enhancer 1 ENCODE dbSUPER 0.4 +8.2 8247 2.5 CEBPG SP1 HNF1A PPARG SP5 ZNF384 ZNF24 RXRA SOX13 CEBPA NDUFV3 PDE9A ENSG00000225731 LOC101928284 LOC105372816
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928284 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928284 Gene

Genomic Locations for LOC101928284 Gene
chr21:42,733,594-42,742,422
(GRCh38/hg38)
Size:
8,829 bases
Orientation:
Minus strand
chr21:44,153,704-44,161,868
(GRCh37/hg19)
Size:
8,165 bases
Orientation:
Minus strand

Genomic View for LOC101928284 Gene

Genes around LOC101928284 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928284 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928284 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928284 Gene

Proteins for LOC101928284 Gene

Post-translational modifications for LOC101928284 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928284 Gene

Domains & Families for LOC101928284 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928284 Gene

Function for LOC101928284 Gene

Phenotypes From GWAS Catalog for LOC101928284 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928284 Gene

Localization for LOC101928284 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928284 Gene

Pathways & Interactions for LOC101928284 Gene

PathCards logo

SuperPathways for LOC101928284 Gene

No Data Available

Interacting Proteins for LOC101928284 Gene

Gene Ontology (GO) - Biological Process for LOC101928284 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928284 Gene

Drugs & Compounds for LOC101928284 Gene

No Compound Related Data Available

Transcripts for LOC101928284 Gene

mRNA/cDNA for LOC101928284 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928284 Gene

No ASD Table

Relevant External Links for LOC101928284 Gene

GeneLoc Exon Structure for
LOC101928284

Expression for LOC101928284 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101928284 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101928284 Gene

This gene is overexpressed in Colon - Transverse (x6.4) and Prostate (x4.3).
genes like me logo Genes that share expression patterns with LOC101928284: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928284 Gene

Orthologs for LOC101928284 Gene

No data available for Orthologs and Evolution for LOC101928284 Gene

Paralogs for LOC101928284 Gene

No data available for Paralogs for LOC101928284 Gene

Variants for LOC101928284 Gene

Sequence variations from dbSNP and Humsavar for LOC101928284 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000745149 -- 42,740,649(-) G/A intron_variant
rs1000823784 -- 42,742,114(-) G/A/C non_coding_transcript_variant
rs1000846847 -- 42,738,387(-) C/T intron_variant
rs1001051753 -- 42,743,700(-) C/G upstream_transcript_variant
rs1001223004 -- 42,744,024(-) C/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928284 Gene

Disorders for LOC101928284 Gene

No disorders were found for LOC101928284 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928284 Gene

Publications for LOC101928284 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 3 58

No data available for External Links for LOC101928284 Gene

Products for LOC101928284 Gene

Sources for LOC101928284 Gene

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