Aliases for LOC101928273 Gene

Data sources for LOC101928273 Gene:

RNA type for LOC101928273 Gene


Aliases for LOC101928273 Gene

External Ids for LOC101928273 Gene

Previous GeneCards Identifiers for LOC101928273 Gene

  • GC02U902592
  • GC02M138637

Summaries for LOC101928273 Gene

GeneCards Summary for LOC101928273 Gene

LOC101928273 (Uncharacterized LOC101928273) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928273 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928273 Gene

Genomics for LOC101928273 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928273 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J137927 Enhancer 1 Ensembl ENCODE 250.7 -1.0 -994 2.4 SSRP1 CEBPA CHD4 FOXA1 HOMEZ KMT2B THAP11 FOXA2 SMAD4 ZNF511 LOC101928273 HSALNG0019142 HNMT
GH02J137939 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 0.4 -14.5 -14511 7 SSRP1 KLF9 CEBPA CHD4 YY1 FOXA1 ZFP64 HOMEZ THAP11 FOXA2 HSALNG0019142 HNMT SPOPL LOC101928273
GH02J137920 Enhancer 0.5 Ensembl 0.4 +5.3 5307 3.4 MAFF ZNF316 MAFK MAFG IKZF1 MNT HSALNG0019141 LOC101928273 HNMT
GH02J137910 Enhancer 0.5 Ensembl 0.4 +16.9 16907 0.2 CHD4 CTCF FOSL2 JUND SOX5 ZKSCAN8 SOX13 RAD21 CREB1 HSALNG0019141 HSALNG0019140 LOC101928273 HNMT
GH02J137888 Enhancer 0.7 Ensembl 0.3 +38.3 38308 1 ZNF654 HOMEZ RAD21 TEAD3 ZNF205 CTCF ZFP37 MXD3 RBPJ ZNF48 HNMT HSALNG0019140 HSALNG0019138 LOC101928273
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928273 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928273 Gene

Latest Assembly
49,256 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
49,179 bases
Minus strand

Genomic View for LOC101928273 Gene

Genes around LOC101928273 on UCSC Golden Path with GeneCards custom track
LOC101928273 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101928273 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928273 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928273 Gene

Proteins for LOC101928273 Gene

Post-translational modifications for LOC101928273 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928273 Gene

Domains & Families for LOC101928273 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928273 Gene

Function for LOC101928273 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928273 Gene

Localization for LOC101928273 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928273 Gene

Pathways & Interactions for LOC101928273 Gene

PathCards logo

SuperPathways for LOC101928273 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928273 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928273 Gene

Drugs & Compounds for LOC101928273 Gene

No Compound Related Data Available

Transcripts for LOC101928273 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928273 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075BDB8_9606 lncRNA 1301 3

RefSeq: NR_120402,

LNCipedia: lnc-NXPH2-5:2,


URS0001BE4389_9606 lncRNA 1308 1

LncBook: HSALNT0040397,

URS000031842C_9606 lncRNA 1269 1

LNCipedia: lnc-NXPH2-5:1,

URS0001BCF5FC_9606 lncRNA 426 1

LncBook: HSALNT0040398,

LOC101928273 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928273 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928273 Gene

No ASD Table

Relevant External Links for LOC101928273 Gene

GeneLoc Exon Structure for

Expression for LOC101928273 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928273

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928273 Gene

Orthologs for LOC101928273 Gene

No data available for Orthologs and Evolution for LOC101928273 Gene

Paralogs for LOC101928273 Gene

No data available for Paralogs for LOC101928273 Gene

Variants for LOC101928273 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101928273 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101928273 Gene

Variant ID Type Subtype PubMed ID
esv2676401 CNV deletion 23128226
esv3592637 CNV loss 21293372
nsv583180 CNV gain 21841781
nsv7329 OTHER inversion 18451855
nsv961891 CNV duplication 23825009

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101928273 Gene

Disorders for LOC101928273 Gene

No disorders were found for LOC101928273 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928273 Gene

Publications for LOC101928273 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC101928273 Gene

Products for LOC101928273 Gene

Sources for LOC101928273 Gene