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Aliases for LOC101928217 Gene

Subcategory (RNA class) for LOC101928217 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC101928217 Gene

  • Uncharacterized LOC101928217 3

External Ids for LOC101928217 Gene

Previous GeneCards Identifiers for LOC101928217 Gene

  • GC04U901738

Summaries for LOC101928217 Gene

GeneCards Summary for LOC101928217 Gene

LOC101928217 (Uncharacterized LOC101928217) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928217 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928217 Gene

Genomics for LOC101928217 Gene

GeneHancer (GH) Regulatory Elements for LOC101928217 Gene

Promoters and enhancers for LOC101928217 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I004031 Enhancer 0.6 Ensembl ENCODE 550.8 +0.5 469 1.7 RFX1 RFX3 LOC101928217 ENPP7P9 ENSG00000271977 FAM86EP GC04P004042 GC04M004021 LOC100130459
GH04I004046 Enhancer 0.5 ENCODE 0.4 +15.0 15015 1.7 PRDM6 L3MBTL2 HMBOX1 PRDM10 SPI1 GC04P004042 GC04M004021 LOC101928217 ENSG00000284727 LOC100130459
GH04I004048 Enhancer 0.4 ENCODE 0.4 +15.9 15914 0 L3MBTL2 PRDM10 GC04M004021 GC04P004042 LOC101928217 LOC100130459 ENSG00000284727
GH04I004006 Enhancer 0.4 ENCODE 0.3 -25.8 -25782 0.2 NFIL3 CEBPA CEBPG GC04P004005 FAM86EP LOC105374359 LOC101928217
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928217 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928217 Gene

Genomic Locations for LOC101928217 Gene
chr4:4,032,391-4,074,289
(GRCh38/hg38)
Size:
41,899 bases
Orientation:
Plus strand

Genomic View for LOC101928217 Gene

Genes around LOC101928217 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928217 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928217 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928217 Gene

Proteins for LOC101928217 Gene

Post-translational modifications for LOC101928217 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928217 Gene

Domains & Families for LOC101928217 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928217 Gene

Function for LOC101928217 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928217 Gene

Localization for LOC101928217 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928217 Gene

Pathways & Interactions for LOC101928217 Gene

SuperPathways for LOC101928217 Gene

No Data Available

Interacting Proteins for LOC101928217 Gene

Gene Ontology (GO) - Biological Process for LOC101928217 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928217 Gene

Drugs & Compounds for LOC101928217 Gene

No Compound Related Data Available

Transcripts for LOC101928217 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928217 Gene

No ASD Table

Relevant External Links for LOC101928217 Gene

GeneLoc Exon Structure for
LOC101928217

No data available for mRNA/cDNA for LOC101928217 Gene

Expression for LOC101928217 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928217 Gene

Orthologs for LOC101928217 Gene

No data available for Orthologs and Evolution for LOC101928217 Gene

Paralogs for LOC101928217 Gene

No data available for Paralogs for LOC101928217 Gene

Variants for LOC101928217 Gene

Sequence variations from dbSNP and Humsavar for LOC101928217 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000052872 -- 4,072,418(+) T/A genic_downstream_transcript_variant, intron_variant
rs1000058308 -- 4,047,852(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000094333 -- 4,044,733(+) C/G genic_downstream_transcript_variant, intron_variant
rs1000104907 -- 4,072,233(+) T/A genic_downstream_transcript_variant, intron_variant
rs1000125575 -- 4,031,555(+) G/A/C genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928217 Gene

Disorders for LOC101928217 Gene

No disorders were found for LOC101928217 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928217 Gene

Publications for LOC101928217 Gene

No publications were found for LOC101928217 Gene.

Products for LOC101928217 Gene

Sources for LOC101928217 Gene

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