Aliases for LOC101928177 Gene

Subcategory (RNA class) for LOC101928177 Gene

lncRNA

Aliases for LOC101928177 Gene

  • Uncharacterized LOC101928177 3

External Ids for LOC101928177 Gene

Previous GeneCards Identifiers for LOC101928177 Gene

  • GC01U903734

Summaries for LOC101928177 Gene

GeneCards Summary for LOC101928177 Gene

LOC101928177 (Uncharacterized LOC101928177) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928177 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928177 Gene

Genomics for LOC101928177 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928177 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J156624 Promoter/Enhancer 1.2 Ensembl ENCODE 0.7 -2.9 -2852 1 RNF2 CTCF IKZF1 JUND ZNF143 ZIC2 MTA1 ZNF501 EZH2 ZNF239 NAXE RRNAD1 ENSG00000223356 MIR9-1HG MIR9-1 ISG20L2 ENSG00000272971 LOC101928177 NONHSAG003130.2 HSALNG0007610
GH01J156625 Promoter/Enhancer 1.1 Ensembl ENCODE 0.7 -4.1 -4127 0.3 HNRNPL CTCF PRDM10 ZNF692 BACH1 TARDBP ZNF143 MTA2 ZSCAN4 REST ENSG00000272971 LOC101928177 HSALNG0007610 BCAN HAPLN2
GH01J156619 Promoter/Enhancer 0.9 EPDnew Ensembl 0.7 +2.5 2546 0.8 CTCF PRDM10 FOXA1 ZNF341 RAD21 CTBP1 FOXA2 ZBTB17 SMC3 ZNF143 NONHSAG003130.2 HAPLN2 TTC24 ENSG00000272971 LOC101928177 HSALNG0007607 BCAN
GH01J156616 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 +5.5 5527 2 PRDM10 LEF1 IKZF1 ZNF692 ZHX2 JUND FOXA1 PRDM1 MTA2 PHF21A KHDC4 MSTO2P GON4L TTC24 HAPLN2 PAQR6 BCAN MIR9-1HG NONHSAG003130.2 ENSG00000272971
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928177 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928177 Gene

Genomic Locations for LOC101928177 Gene
chr1:156,614,742-156,621,928
(GRCh38/hg38)
Size:
7,187 bases
Orientation:
Minus strand

Genomic View for LOC101928177 Gene

Genes around LOC101928177 on UCSC Golden Path with GeneCards custom track
LOC101928177 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101928177 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928177 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928177 Gene

Proteins for LOC101928177 Gene

Post-translational modifications for LOC101928177 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928177 Gene

Domains & Families for LOC101928177 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928177 Gene

Function for LOC101928177 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928177 Gene

Localization for LOC101928177 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928177 Gene

Pathways & Interactions for LOC101928177 Gene

PathCards logo

SuperPathways for LOC101928177 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928177 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928177 Gene

Drugs & Compounds for LOC101928177 Gene

No Compound Related Data Available

Transcripts for LOC101928177 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928177 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000A7750E_9606 lncRNA 385 1

RefSeq: NR_135113,

LOC101928177 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928177 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928177 Gene

No ASD Table

Relevant External Links for LOC101928177 Gene

GeneLoc Exon Structure for
LOC101928177

Expression for LOC101928177 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928177 Gene

Orthologs for LOC101928177 Gene

No data available for Orthologs and Evolution for LOC101928177 Gene

Paralogs for LOC101928177 Gene

No data available for Paralogs for LOC101928177 Gene

Variants for LOC101928177 Gene

Additional dbSNP identifiers (rs#s) for LOC101928177 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928177 Gene

Disorders for LOC101928177 Gene

No disorders were found for LOC101928177 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928177 Gene

Publications for LOC101928177 Gene

No publications were found for LOC101928177 Gene.

No data available for Mastermind for LOC101928177 Gene

Products for LOC101928177 Gene

Sources for LOC101928177 Gene