Aliases for LOC101928143 Gene

Data sources for LOC101928143 Gene:

Subcategory (RNA class) for LOC101928143 Gene

lncRNA

Aliases for LOC101928143 Gene

External Ids for LOC101928143 Gene

Previous GeneCards Identifiers for LOC101928143 Gene

  • GC14U901407

Summaries for LOC101928143 Gene

GeneCards Summary for LOC101928143 Gene

LOC101928143 (Uncharacterized LOC101928143) is an RNA Gene, and is affiliated with the lncRNA class. Among its related pathways are Signaling by GPCR and L1CAM interactions.

Additional gene information for LOC101928143 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928143 Gene

Genomics for LOC101928143 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928143 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J073464 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 250.7 -1.0 -989 5.5 BCL11A FEZF1 TRIM22 ZNF316 FOSL1 NFE2 BHLHE40 BATF HNF4A STAT5A LOC101928143 NUMB PSEN1 ACOT1 HEATR4 ENSG00000258376 ENSG00000258695 DCAF4 ZNF410 ZFYVE1
GH14J073456 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +6.6 6635 9.5 CHD2 TBP SP1 FEZF1 CEBPA MNT IKZF1 SMAD5 MBD2 POLR2A NUMB DPF3 RBM25 MIDEAS ZNF410 DCAF4 ENSG00000259015 ENSG00000258559 ENSG00000258695 ENSG00000258944
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928143 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928143 Gene

Latest Assembly
chr14:73,458,849-73,466,167
(GRCh38/hg38)
Size:
7,319 bases
Orientation:
Minus strand

Previous Assembly
chr14:73,927,641-73,930,348
(GRCh37/hg19 by Entrez Gene)
Size:
2,708 bases
Orientation:
Minus strand

Genomic View for LOC101928143 Gene

Genes around LOC101928143 on UCSC Golden Path with GeneCards custom track
LOC101928143 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101928143 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928143 Gene

Proteins for LOC101928143 Gene

Post-translational modifications for LOC101928143 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928143 Gene

Domains & Families for LOC101928143 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928143 Gene

Function for LOC101928143 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928143 Gene

Localization for LOC101928143 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928143 Gene

Pathways & Interactions for LOC101928143 Gene

genes like me logo Genes that share pathways with LOC101928143: view

Pathways by source for LOC101928143 Gene

Gene Ontology (GO) - Biological Process for LOC101928143 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for LOC101928143 Gene

Drugs & Compounds for LOC101928143 Gene

No Compound Related Data Available

Transcripts for LOC101928143 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928143 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008BED24_9606 lncRNA 781 4

Ensembl: ENST00000647202 (view in UCSC) ,

LncBook: HSALNT0213016,

LNCipedia: lnc-NUMB-1:3,

NONCODE: NONHSAT037701.2,

URS00008C3B90_9606 lncRNA 497 4

Ensembl: ENST00000643731 (view in UCSC) ,

LncBook: HSALNT0213018,

LNCipedia: lnc-NUMB-1:5,

NONCODE: NONHSAT037703.2,

URS00008B9C4A_9606 lncRNA 320 4

Ensembl: ENST00000646944 (view in UCSC) ,

LncBook: HSALNT0213017,

LNCipedia: lnc-NUMB-1:1,

NONCODE: NONHSAT037702.2,

URS00008BB040_9606 lncRNA 638 2

Ensembl: ENST00000557577 (view in UCSC) ,

LNCipedia: lnc-NUMB-1:9,

URS0000D61CD7_9606 lncRNA 595 2

Ensembl: ENST00000557581 (view in UCSC) ,

LNCipedia: lnc-NUMB-1:14,

LOC101928143 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928143 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928143 Gene

No ASD Table

Relevant External Links for LOC101928143 Gene

GeneLoc Exon Structure for
LOC101928143

Expression for LOC101928143 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928143 Gene

Orthologs for LOC101928143 Gene

Evolution for LOC101928143 Gene

ENSEMBL:
Gene Tree for LOC101928143 (if available)
TreeFam:
Gene Tree for LOC101928143 (if available)

No data available for Orthologs for LOC101928143 Gene

Paralogs for LOC101928143 Gene

No data available for Paralogs for LOC101928143 Gene

Variants for LOC101928143 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101928143 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928143 Gene

Disorders for LOC101928143 Gene

No disorders were found for LOC101928143 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928143 Gene

Publications for LOC101928143 Gene

No publications were found for LOC101928143 Gene.

No data available for Mastermind for LOC101928143 Gene

Products for LOC101928143 Gene

Sources for LOC101928143 Gene