Aliases for LOC101928126 Gene

Data sources for LOC101928126 Gene:

RNA type for LOC101928126 Gene

lncRNA

Aliases for LOC101928126 Gene

External Ids for LOC101928126 Gene

Previous GeneCards Identifiers for LOC101928126 Gene

  • GC21U900529

Summaries for LOC101928126 Gene

GeneCards Summary for LOC101928126 Gene

LOC101928126 (Uncharacterized LOC101928126) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928126 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928126 Gene

Genomics for LOC101928126 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101928126 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J033975 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 250.7 +0.2 235 3.4 BCLAF1 SP1 IKZF1 NCOR1 JUND ZNF592 POLR2A NFIC BCL11A SMAD5 LOC101928126 DONSON SON GART LINC00649 TMEM50B ATP5PO LOC105372790 ENSG00000249209 HSALNG0132813-002
GH21J033974 Enhancer 0.6 ENCODE dbSUPER 250.7 -1.7 -1707 0 MLLT1 ZNF512 MTA2 WT1 LOC101928126 piR-38580-189 ENSG00000249209 HSALNG0132813-002 LINC00649 MRPS6
GH21J033980 Enhancer 0.9 ENCODE dbSUPER 0.7 +4.1 4113 0.2 CEBPA HOMEZ RAD51 THAP11 RXRA SAP130 MIER3 RARA GABPB1 JUND LOC105372790 LOC101928126 ENSG00000249209 LINC00649 MRPS6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928126 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101928126 Gene

Latest Assembly
chr21:33,976,382-33,977,691
(GRCh38/hg38)
Size:
1,310 bases
Orientation:
Plus strand

Previous Assembly
chr21:35,348,683-35,349,992
(GRCh37/hg19 by Entrez Gene)
Size:
1,310 bases
Orientation:
Plus strand

Genomic View for LOC101928126 Gene

Genes around LOC101928126 on UCSC Golden Path with GeneCards custom track
LOC101928126 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101928126 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928126 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928126 Gene

Proteins for LOC101928126 Gene

Post-translational modifications for LOC101928126 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928126 Gene

Domains & Families for LOC101928126 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928126 Gene

Function for LOC101928126 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928126 Gene

Localization for LOC101928126 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928126 Gene

Pathways & Interactions for LOC101928126 Gene

PathCards logo

SuperPathways for LOC101928126 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928126 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928126 Gene

Drugs & Compounds for LOC101928126 Gene

No Compound Related Data Available

Transcripts for LOC101928126 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101928126 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000A7703C_9606 lncRNA 1134 1

RefSeq: NR_134561,

URS0001BCD3F9_9606 lncRNA 2586 1

LncBook: HSALNT0272992,

URS0001BD7ACC_9606 lncRNA 451 1

LncBook: HSALNT0273025,

LOC101928126 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101928126 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928126 Gene

No ASD Table

Relevant External Links for LOC101928126 Gene

GeneLoc Exon Structure for
LOC101928126

Expression for LOC101928126 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928126 Gene

Orthologs for LOC101928126 Gene

No data available for Orthologs and Evolution for LOC101928126 Gene

Paralogs for LOC101928126 Gene

No data available for Paralogs for LOC101928126 Gene

Variants for LOC101928126 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101928126 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928126 Gene

Disorders for LOC101928126 Gene

No disorders were found for LOC101928126 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928126 Gene

Publications for LOC101928126 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  2. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3

No data available for Mastermind for LOC101928126 Gene

Products for LOC101928126 Gene

Sources for LOC101928126 Gene