Aliases for LOC101928080 Gene

Subcategory (RNA class) for LOC101928080 Gene

ncRNA

Aliases for LOC101928080 Gene

  • Uncharacterized LOC101928080 3

External Ids for LOC101928080 Gene

Previous GeneCards Identifiers for LOC101928080 Gene

  • GC10U901805

Summaries for LOC101928080 Gene

GeneCards Summary for LOC101928080 Gene

LOC101928080 (Uncharacterized LOC101928080) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928080 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928080 Gene

Genomics for LOC101928080 Gene

GeneHancer (GH) Regulatory Elements for LOC101928080 Gene

Promoters and enhancers for LOC101928080 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J006140 Enhancer 1.1 ENCODE dbSUPER 500.7 -0.4 -360 2.3 SIN3A SP1 TEAD4 FOS EP300 AFF1 JUND RELA MEF2C RCOR1 LOC101928080 lnc-PFKFB3-1 RBM17 lnc-IL2RA-8
GH10J006142 Enhancer 0.4 ENCODE dbSUPER 500.7 -1.7 -1716 0.2 NR2F1 LOC101928080 lnc-IL2RA-8
GH10J006135 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 +4.5 4471 1.4 FOS EP300 JUND RELA MEF2C RBM25 CTCF BCL11A ARNT MEF2B lnc-IL2RA-2 RBM17 LINC02649 LOC101928080 HSALNG0075920
GH10J006129 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +11.0 10993 0.9 AFF1 RELA HES1 CTBP1 MCM3 NCOR1 CBFB ZNF263 NBN SMARCA5 PFKFB3 FBH1 ENSG00000232807 RBM17 TASOR2 ENSG00000226647 LINC02649 IL15RA HSALNG0075920 lnc-IL2RA-2
GH10J006136 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +6.4 6357 1.2 ZIC2 ZNF384 ARNT SMARCA5 IKZF1 NR2F1 NFATC3 SUZ12 L3MBTL2 MAX RBM17 LINC02649 lnc-IL2RA-2 HSALNG0075920 LOC101928080
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928080 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928080 Gene

Genomic Locations for LOC101928080 Gene
chr10:6,121,798-6,141,157
(GRCh38/hg38)
Size:
19,360 bases
Orientation:
Minus strand

Genomic View for LOC101928080 Gene

Genes around LOC101928080 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928080 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928080 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928080 Gene

Proteins for LOC101928080 Gene

Post-translational modifications for LOC101928080 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928080 Gene

Domains & Families for LOC101928080 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928080 Gene

Function for LOC101928080 Gene

Phenotypes From GWAS Catalog for LOC101928080 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928080 Gene

Localization for LOC101928080 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928080 Gene

Pathways & Interactions for LOC101928080 Gene

PathCards logo

SuperPathways for LOC101928080 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101928080 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928080 Gene

Drugs & Compounds for LOC101928080 Gene

No Compound Related Data Available

Transcripts for LOC101928080 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928080 Gene

No ASD Table

Relevant External Links for LOC101928080 Gene

GeneLoc Exon Structure for
LOC101928080

No data available for mRNA/cDNA for LOC101928080 Gene

Expression for LOC101928080 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928080

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928080 Gene

Orthologs for LOC101928080 Gene

No data available for Orthologs and Evolution for LOC101928080 Gene

Paralogs for LOC101928080 Gene

No data available for Paralogs for LOC101928080 Gene

Variants for LOC101928080 Gene

Additional dbSNP identifiers (rs#s) for LOC101928080 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928080 Gene

Disorders for LOC101928080 Gene

No disorders were found for LOC101928080 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928080 Gene

Publications for LOC101928080 Gene

No publications were found for LOC101928080 Gene.

No data available for Mastermind for LOC101928080 Gene

Products for LOC101928080 Gene

Sources for LOC101928080 Gene