Aliases for LOC101928068 Gene

Subcategory (RNA class) for LOC101928068 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC101928068 Gene

  • Uncharacterized LOC101928068 3
  • NONHSAG004873 92
  • Lnc-HNRNPU-5 168

External Ids for LOC101928068 Gene

Previous GeneCards Identifiers for LOC101928068 Gene

  • GC01U903927

Summaries for LOC101928068 Gene

GeneCards Summary for LOC101928068 Gene

LOC101928068 (Uncharacterized LOC101928068) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101928068 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928068 Gene

Genomics for LOC101928068 Gene

GeneHancer (GH) Regulatory Elements for LOC101928068 Gene

Promoters and enhancers for LOC101928068 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J244967 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.5 498 4.9 EP300 HNRNPK ZBTB40 ZNF217 CTCF ZSCAN5C SIN3A NRF1 TCF12 POLR2G ENSG00000272195 EFCAB2 LOC101928068 KIF26B HNRNPU COX20 DESI2 ADSS2
GH01J244962 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 0.4 +6.6 6580 3.6 ZSCAN5C TCF12 JUND FOS USF2 JUN HINFP RBM25 NCOR1 ZNF316 lnc-EFCAB2-2 EFCAB2 ENSG00000272195 HNRNPU LOC101928068
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928068 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928068 Gene

Genomic Locations for LOC101928068 Gene
chr1:244,965,204-244,970,869
(GRCh38/hg38)
Size:
5,666 bases
Orientation:
Minus strand

Genomic View for LOC101928068 Gene

Genes around LOC101928068 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928068 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928068 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928068 Gene

Proteins for LOC101928068 Gene

Post-translational modifications for LOC101928068 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928068 Gene

Domains & Families for LOC101928068 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928068 Gene

Function for LOC101928068 Gene

Phenotypes From GWAS Catalog for LOC101928068 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928068 Gene

Localization for LOC101928068 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928068 Gene

Pathways & Interactions for LOC101928068 Gene

PathCards logo

SuperPathways for LOC101928068 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101928068 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101928068 Gene

Drugs & Compounds for LOC101928068 Gene

No Compound Related Data Available

Transcripts for LOC101928068 Gene

mRNA/cDNA for LOC101928068 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :
1 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928068 Gene

No ASD Table

Relevant External Links for LOC101928068 Gene

GeneLoc Exon Structure for
LOC101928068

Expression for LOC101928068 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101928068

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928068 Gene

Orthologs for LOC101928068 Gene

No data available for Orthologs and Evolution for LOC101928068 Gene

Paralogs for LOC101928068 Gene

No data available for Paralogs for LOC101928068 Gene

Variants for LOC101928068 Gene

Additional dbSNP identifiers (rs#s) for LOC101928068 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101928068 Gene

Variant ID Type Subtype PubMed ID
dgv602n100 CNV gain 25217958
esv22057 CNV loss 19812545
esv2726729 CNV deletion 23290073
esv2726740 CNV deletion 23290073
esv3589420 CNV loss 21293372
nsv471922 CNV novel sequence insertion 20440878
nsv5188 CNV insertion 18451855

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101928068 Gene

Disorders for LOC101928068 Gene

No disorders were found for LOC101928068 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928068 Gene

Publications for LOC101928068 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC101928068 Gene

Products for LOC101928068 Gene

Sources for LOC101928068 Gene