Aliases for LOC101928037 Gene

Subcategory (RNA class) for LOC101928037 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101928037 Gene

  • Uncharacterized LOC101928037 3

External Ids for LOC101928037 Gene

Previous GeneCards Identifiers for LOC101928037 Gene

  • GC08U901749

Summaries for LOC101928037 Gene

GeneCards Summary for LOC101928037 Gene

LOC101928037 (Uncharacterized LOC101928037) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928037 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101928037 Gene

Genomics for LOC101928037 Gene

GeneHancer (GH) Regulatory Elements for LOC101928037 Gene

Promoters and enhancers for LOC101928037 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J141374 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 750.6 +1.4 1418 2.6 ZNF24 MLX NR2F1 NR2F6 ELF3 SP1 GLIS2 RXRA GATAD2A RXRB LOC101928037 lnc-PTP4A3-1 GPR20 SLC45A4 RF00017-7358
GH08J141372 Enhancer 0.7 ENCODE CraniofacialAtlas dbSUPER 750.6 -1.0 -965 1 NR2F2 ZNF580 KDM1A LOC101928037 lnc-PTP4A3-1 GPR20
GH08J141382 Enhancer 0.7 Ensembl ENCODE 0.4 +6.5 6517 2.2 SP1 NFYC CEBPA SP2 MBD2 CEBPB IKZF1 FOS FOXA3 GPR20 RF00017-7358 LOC101928037 lnc-PTP4A3-1
GH08J141378 Enhancer 0.4 ENCODE dbSUPER 0.6 +4.4 4373 0.2 RCOR1 LOC101928037 RF00017-7358 lnc-PTP4A3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101928037 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928037 Gene

Genomic Locations for LOC101928037 Gene
chr8:141,374,183-141,382,220
(GRCh38/hg38)
Size:
8,038 bases
Orientation:
Plus strand

Genomic View for LOC101928037 Gene

Genes around LOC101928037 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928037 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928037 Gene

Proteins for LOC101928037 Gene

Post-translational modifications for LOC101928037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928037 Gene

Domains & Families for LOC101928037 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101928037 Gene

Function for LOC101928037 Gene

Phenotypes From GWAS Catalog for LOC101928037 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928037 Gene

Localization for LOC101928037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928037 Gene

Pathways & Interactions for LOC101928037 Gene

PathCards logo

SuperPathways for LOC101928037 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101928037 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928037 Gene

Drugs & Compounds for LOC101928037 Gene

No Compound Related Data Available

Transcripts for LOC101928037 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928037 Gene

No ASD Table

Relevant External Links for LOC101928037 Gene

GeneLoc Exon Structure for
LOC101928037

No data available for mRNA/cDNA for LOC101928037 Gene

Expression for LOC101928037 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928037 Gene

Orthologs for LOC101928037 Gene

No data available for Orthologs and Evolution for LOC101928037 Gene

Paralogs for LOC101928037 Gene

No data available for Paralogs for LOC101928037 Gene

Variants for LOC101928037 Gene

Sequence variations from dbSNP and Humsavar for LOC101928037 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000068372 -- 141,376,706(+) C/A/T intron_variant
rs1000104902 -- 141,378,384(+) G/T intron_variant
rs1000469481 -- 141,378,055(+) G/A/C intron_variant
rs1001263305 -- 141,382,664(+) T/G downstream_transcript_variant
rs1001738315 -- 141,379,069(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928037 Gene

Disorders for LOC101928037 Gene

No disorders were found for LOC101928037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928037 Gene

Publications for LOC101928037 Gene

No publications were found for LOC101928037 Gene.

No data available for External Links for LOC101928037 Gene

Products for LOC101928037 Gene

Sources for LOC101928037 Gene