Aliases for LOC101927949 Gene

Subcategory (RNA class) for LOC101927949 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101927949 Gene

  • Uncharacterized LOC101927949 3

External Ids for LOC101927949 Gene

Previous GeneCards Identifiers for LOC101927949 Gene

  • GC01U903633

Summaries for LOC101927949 Gene

GeneCards Summary for LOC101927949 Gene

LOC101927949 (Uncharacterized LOC101927949) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927949 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927949 Gene

Genomics for LOC101927949 Gene

GeneHancer (GH) Regulatory Elements for LOC101927949 Gene

Promoters and enhancers for LOC101927949 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J152045 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +1.3 1274 6.6 SIN3A SP1 ZBTB40 CTCF SREBF1 ZBTB6 SMARCE1 POLR2A TCF7L2 USF2 S100A11 LOC101927949 PI4KB PIP5K1A ZNF687 MRPL9 GABPB2 RN7SL444P ENSG00000229021 FLG-AS1
GH01J152052 Enhancer 0.9 ENCODE dbSUPER 0.6 -2.9 -2862 0.2 CTCF CC2D1A HLF MAX RAD21 ZNF280D CEBPG MLLT1 CEBPA YBX1 LOC101927949 HSALNG0007215
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927949 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927949 Gene

Genomic Locations for LOC101927949 Gene
chr1:152,047,296-152,049,878
(GRCh38/hg38)
Size:
2,583 bases
Orientation:
Minus strand

Genomic View for LOC101927949 Gene

Genes around LOC101927949 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927949 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927949 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927949 Gene

Proteins for LOC101927949 Gene

Post-translational modifications for LOC101927949 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927949 Gene

Domains & Families for LOC101927949 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927949 Gene

Function for LOC101927949 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927949 Gene

Localization for LOC101927949 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927949 Gene

Pathways & Interactions for LOC101927949 Gene

PathCards logo

SuperPathways for LOC101927949 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927949 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927949 Gene

Drugs & Compounds for LOC101927949 Gene

No Compound Related Data Available

Transcripts for LOC101927949 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927949 Gene

No ASD Table

Relevant External Links for LOC101927949 Gene

GeneLoc Exon Structure for
LOC101927949

No data available for mRNA/cDNA for LOC101927949 Gene

Expression for LOC101927949 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927949 Gene

Orthologs for LOC101927949 Gene

No data available for Orthologs and Evolution for LOC101927949 Gene

Paralogs for LOC101927949 Gene

No data available for Paralogs for LOC101927949 Gene

Variants for LOC101927949 Gene

Sequence variations from dbSNP and Humsavar for LOC101927949 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000015698 -- 152,049,763(-) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000965851 -- 152,047,575(-) C/T downstream_transcript_variant, genic_downstream_transcript_variant, non_coding_transcript_variant
rs1001022751 -- 152,051,451(-) G/T upstream_transcript_variant
rs1001183806 -- 152,050,963(-) G/C upstream_transcript_variant
rs1001311514 -- 152,049,942(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927949 Gene

Disorders for LOC101927949 Gene

No disorders were found for LOC101927949 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927949 Gene

Publications for LOC101927949 Gene

No publications were found for LOC101927949 Gene.

No data available for External Links for LOC101927949 Gene

Products for LOC101927949 Gene

Sources for LOC101927949 Gene