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Aliases for LOC101927902 Gene

Subcategory (RNA class) for LOC101927902 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927902 Gene

  • Uncharacterized LOC101927902 3
  • AC007384.1 5

External Ids for LOC101927902 Gene

Previous GeneCards Identifiers for LOC101927902 Gene

  • GC07U903616
  • GC07P104582

Summaries for LOC101927902 Gene

GeneCards Summary for LOC101927902 Gene

LOC101927902 (Uncharacterized LOC101927902) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927902 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927902 Gene

Genomics for LOC101927902 Gene

GeneHancer (GH) Regulatory Elements for LOC101927902 Gene

Promoters and enhancers for LOC101927902 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I104937 Enhancer 0.6 dbSUPER 558.6 -1.8 -1797 2.5 HDAC1 MEIS2 ZNF202 SOX6 TEAD4 TAL1 CBFA2T3 ZBTB8A HDAC2 CBFA2T2 LOC101927902 RINT1 ORC5 ATXN7L1 KMT2E KMT2E-AS1 LHFPL3-AS2
GH07I104940 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 9 +2.7 2714 6.5 FEZF1 DMAP1 YBX1 IRF4 SLC30A9 ZNF213 ZNF143 SP3 NFYC MEF2D ORC5 RINT1 LINC01004 ATXN7L1 KMT2E RNU6-1322P KMT2E-AS1 LOC101927902 SRPK2 GC07P104968
GH07I105005 Promoter/Enhancer 2.6 EPDnew Ensembl ENCODE dbSUPER 5.8 +71.4 71371 12.7 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 KMT2E LINC01004 RINT1 ATXN7L1 EIF4BP6 KMT2E-AS1 ORC5 PUS7 YBX1P2 SRPK2
GH07I105266 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 7.1 +327.6 327635 3.7 PKNOX1 CLOCK ATF1 ARNT NEUROD1 FEZF1 BRCA1 YY1 NCOA2 ZNF213 SRPK2 EIF4BP6 RINT1 KMT2E RWDD4P1 ENSG00000242154 RNU6-1322P ATXN7L1 LOC101927902 RPL36P12
GH07I105387 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 5.5 +447.8 447759 2.6 ARID4B SIN3A DMAP1 ZBTB7B ZNF213 ZNF143 KLF13 MXD4 REST SMARCB1 SRPK2 LOC101927902 LOC101927923
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101927902 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927902 Gene

Genomic Locations for LOC101927902 Gene
chr7:104,940,933-105,002,028
(GRCh38/hg38)
Size:
61,096 bases
Orientation:
Plus strand
chr7:104,581,510-104,602,781
(GRCh37/hg19)

Genomic View for LOC101927902 Gene

Genes around LOC101927902 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927902 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927902 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927902 Gene

Proteins for LOC101927902 Gene

Post-translational modifications for LOC101927902 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927902 Gene

Domains & Families for LOC101927902 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927902 Gene

Function for LOC101927902 Gene

Phenotypes From GWAS Catalog for LOC101927902 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927902 Gene

Localization for LOC101927902 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927902 Gene

Pathways & Interactions for LOC101927902 Gene

SuperPathways for LOC101927902 Gene

No Data Available

Interacting Proteins for LOC101927902 Gene

Gene Ontology (GO) - Biological Process for LOC101927902 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927902 Gene

Drugs & Compounds for LOC101927902 Gene

No Compound Related Data Available

Transcripts for LOC101927902 Gene

mRNA/cDNA for LOC101927902 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927902 Gene

No ASD Table

Relevant External Links for LOC101927902 Gene

GeneLoc Exon Structure for
LOC101927902

Expression for LOC101927902 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927902 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101927902 Gene

This gene is overexpressed in Whole Blood (x19.0) and Spleen (x4.8).
genes like me logo Genes that share expression patterns with LOC101927902: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927902 Gene

Orthologs for LOC101927902 Gene

Evolution for LOC101927902 Gene

ENSEMBL:
Gene Tree for LOC101927902 (if available)
TreeFam:
Gene Tree for LOC101927902 (if available)

No data available for Orthologs for LOC101927902 Gene

Paralogs for LOC101927902 Gene

No data available for Paralogs for LOC101927902 Gene

Variants for LOC101927902 Gene

Sequence variations from dbSNP and Humsavar for LOC101927902 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000003054 -- 104,959,560(+) A/G intron_variant
rs1000087273 -- 104,954,249(+) G/T intron_variant
rs1000097624 -- 104,996,933(+) A/T genic_downstream_transcript_variant, intron_variant
rs1000102139 -- 105,002,678(+) T/C genic_downstream_transcript_variant, non_coding_transcript_variant
rs1000107964 -- 104,968,271(+) C/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927902 Gene

Disorders for LOC101927902 Gene

Additional Disease Information for LOC101927902

No disorders were found for LOC101927902 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927902 Gene

Publications for LOC101927902 Gene

No publications were found for LOC101927902 Gene.

Products for LOC101927902 Gene

Sources for LOC101927902 Gene

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