Aliases for LOC101927898 Gene

Subcategory (RNA class) for LOC101927898 Gene

ncRNA

Aliases for LOC101927898 Gene

  • Uncharacterized LOC101927898 3

External Ids for LOC101927898 Gene

Previous GeneCards Identifiers for LOC101927898 Gene

  • GC17U901938

Summaries for LOC101927898 Gene

GeneCards Summary for LOC101927898 Gene

LOC101927898 (Uncharacterized LOC101927898) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927898 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927898 Gene

Genomics for LOC101927898 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927898 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J063691 Enhancer 0.3 dbSUPER 600.7 -0.7 -707 0.9 SIX4 LOC101927898 FTSJ3 LIMD2 piR-33059 STRADA MAP3K3
GH17J063674 Enhancer 1.4 VISTA ENCODE dbSUPER 0.4 +15.0 15020 3.5 CREB1 ARID3A PRDM10 ZNF629 LEF1 IKZF1 TARDBP ZHX2 JUND FOXA1 FTSJ3 LIMD2 STRADA ENSG00000125695 TACO1 LOC107984984 LOC101927898 MAP3K3
GH17J063679 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +10.1 10100 2.2 CREB1 ARID3A SP1 CTBP1 ZNF444 YY1 GABPA ZNF592 MLLT1 ZNF217 FTSJ3 PSMC5 SMARCD2 TACO1 LOC107984984 LOC101927898 LIMD2 MAP3K3
GH17J063673 Enhancer 0.7 Ensembl dbSUPER 0.4 +18.3 18300 0.2 ZBTB33 ZFX ZNF512B ZNF207 NONO RCOR1 ZBTB1 LOC107984984 FTSJ3 LIMD2 STRADA ENSG00000125695 LOC101927898 MAP3K3
GH17J063685 Enhancer 0.3 Ensembl 0.4 +5.7 5700 0.2 ZIC2 LOC101927898 LOC107984984 LIMD2 STRADA MAP3K3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927898 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927898 Gene

Genomic Locations for LOC101927898 Gene
chr17:63,682,336-63,691,001
(GRCh38/hg38)
Size:
8,666 bases
Orientation:
Minus strand

Genomic View for LOC101927898 Gene

Genes around LOC101927898 on UCSC Golden Path with GeneCards custom track
LOC101927898 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101927898 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927898 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927898 Gene

Proteins for LOC101927898 Gene

Post-translational modifications for LOC101927898 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927898 Gene

Domains & Families for LOC101927898 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927898 Gene

Function for LOC101927898 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927898 Gene

Localization for LOC101927898 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927898 Gene

Pathways & Interactions for LOC101927898 Gene

PathCards logo

SuperPathways for LOC101927898 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927898 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927898 Gene

Drugs & Compounds for LOC101927898 Gene

No Compound Related Data Available

Transcripts for LOC101927898 Gene

LOC101927898 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927898 Gene

No ASD Table

Relevant External Links for LOC101927898 Gene

GeneLoc Exon Structure for
LOC101927898

No data available for mRNA/cDNA for LOC101927898 Gene

Expression for LOC101927898 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927898 Gene

Orthologs for LOC101927898 Gene

No data available for Orthologs and Evolution for LOC101927898 Gene

Paralogs for LOC101927898 Gene

No data available for Paralogs for LOC101927898 Gene

Variants for LOC101927898 Gene

Additional dbSNP identifiers (rs#s) for LOC101927898 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927898 Gene

Disorders for LOC101927898 Gene

No disorders were found for LOC101927898 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927898 Gene

Publications for LOC101927898 Gene

  1. Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci. (PMID: 25429064) He M … Qi L (Human molecular genetics 2015) 3
  2. Genome-wide association study of body height in African Americans: the Women's Health Initiative SNP Health Association Resource (SHARe). (PMID: 22021425) Carty CL … Kooperberg C (Human molecular genetics 2012) 3
  3. Identification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry. (PMID: 21998595) N'Diaye A … Haiman CA (PLoS genetics 2011) 3

No data available for Mastermind for LOC101927898 Gene

Products for LOC101927898 Gene

Sources for LOC101927898 Gene