Aliases for LOC101927881 Gene

Data sources for LOC101927881 Gene:

RNA type for LOC101927881 Gene

lncRNA

Aliases for LOC101927881 Gene

External Ids for LOC101927881 Gene

Previous GeneCards Identifiers for LOC101927881 Gene

  • GC02U902626

Summaries for LOC101927881 Gene

GeneCards Summary for LOC101927881 Gene

LOC101927881 (Uncharacterized LOC101927881) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927881 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927881 Gene

Genomics for LOC101927881 Gene

Genomic Locations for LOC101927881 Gene

Latest Assembly
chr2:128,864,599-128,868,728
(GRCh38/hg38)
Size:
4,130 bases
Orientation:
Plus strand

Previous Assembly
chr2:129,622,174-129,626,301
(GRCh37/hg19 by Entrez Gene)
Size:
4,128 bases
Orientation:
Plus strand

Genomic View for LOC101927881 Gene

Genes around LOC101927881 on UCSC Golden Path with GeneCards custom track
LOC101927881 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101927881 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927881 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927881 Gene

No data available for GeneHancer (GH) Regulatory Elements for LOC101927881 Gene

Proteins for LOC101927881 Gene

Post-translational modifications for LOC101927881 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927881 Gene

Domains & Families for LOC101927881 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927881 Gene

Function for LOC101927881 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927881 Gene

Localization for LOC101927881 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927881 Gene

Pathways & Interactions for LOC101927881 Gene

PathCards logo

SuperPathways for LOC101927881 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927881 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927881 Gene

Drugs & Compounds for LOC101927881 Gene

No Compound Related Data Available

Transcripts for LOC101927881 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101927881 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075DAE0_9606 lncRNA 1091 2

RefSeq: NR_110278,

LNCipedia: lnc-UGGT1-1:2,

URS00008B3550_9606 lncRNA 1086 2

LNCipedia: lnc-UGGT1-1:1,

NONCODE: NONHSAT074231.2,

URS00008BEAD9_9606 lncRNA 1022 2

LNCipedia: lnc-UGGT1-1:3,

NONCODE: NONHSAT074232.2,

URS00009AF579_9606 lncRNA 1086 1

NONCODE: NONHSAT182637.1,

LOC101927881 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101927881 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927881 Gene

No ASD Table

Relevant External Links for LOC101927881 Gene

GeneLoc Exon Structure for
LOC101927881

Expression for LOC101927881 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101927881

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927881 Gene

Orthologs for LOC101927881 Gene

No data available for Orthologs and Evolution for LOC101927881 Gene

Paralogs for LOC101927881 Gene

No data available for Paralogs for LOC101927881 Gene

Variants for LOC101927881 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101927881 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101927881 Gene

Variant ID Type Subtype PubMed ID
esv3592397 CNV gain 21293372
esv3592399 CNV gain 21293372
esv3592403 CNV loss 21293372
nsv1150306 CNV duplication 26484159
nsv2916 CNV deletion 18451855
nsv459274 CNV loss 19166990
nsv583046 CNV loss 21841781
nsv583047 CNV loss 21841781
nsv821629 CNV loss 15273396
nsv834371 CNV gain+loss 17160897

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101927881 Gene

Disorders for LOC101927881 Gene

No disorders were found for LOC101927881 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927881 Gene

Publications for LOC101927881 Gene

No publications were found for LOC101927881 Gene.

No data available for Mastermind for LOC101927881 Gene

Products for LOC101927881 Gene

Sources for LOC101927881 Gene