Aliases for LOC101927840 Gene

Subcategory (RNA class) for LOC101927840 Gene

ncRNA

Aliases for LOC101927840 Gene

  • Uncharacterized LOC101927840 3

External Ids for LOC101927840 Gene

Previous GeneCards Identifiers for LOC101927840 Gene

  • GC02U902752

Summaries for LOC101927840 Gene

GeneCards Summary for LOC101927840 Gene

LOC101927840 (Uncharacterized LOC101927840) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927840 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927840 Gene

Genomics for LOC101927840 Gene

GeneHancer (GH) Regulatory Elements for LOC101927840 Gene

Promoters and enhancers for LOC101927840 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J203936 Promoter/Enhancer 1.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.1 2109 5.4 EP300 POLR2A MLLT1 ICOS CD28 CTLA4 LOC101927840
GH02J203934 Enhancer 0.5 FANTOM5 dbSUPER 0.4 +6.6 6553 0.3 POLR2A ICOS CD28 CTLA4 LOC101927840 HSALNG0021704
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927840 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927840 Gene

Genomic Locations for LOC101927840 Gene
chr2:203,932,317-203,940,810
(GRCh38/hg38)
Size:
8,494 bases
Orientation:
Minus strand

Genomic View for LOC101927840 Gene

Genes around LOC101927840 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927840 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927840 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927840 Gene

Proteins for LOC101927840 Gene

Post-translational modifications for LOC101927840 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927840 Gene

Domains & Families for LOC101927840 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927840 Gene

Function for LOC101927840 Gene

Phenotypes From GWAS Catalog for LOC101927840 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927840 Gene

Localization for LOC101927840 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927840 Gene

Pathways & Interactions for LOC101927840 Gene

PathCards logo

SuperPathways for LOC101927840 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101927840 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927840 Gene

Drugs & Compounds for LOC101927840 Gene

No Compound Related Data Available

Transcripts for LOC101927840 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927840 Gene

No ASD Table

Relevant External Links for LOC101927840 Gene

GeneLoc Exon Structure for
LOC101927840

No data available for mRNA/cDNA for LOC101927840 Gene

Expression for LOC101927840 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927840 Gene

Orthologs for LOC101927840 Gene

No data available for Orthologs and Evolution for LOC101927840 Gene

Paralogs for LOC101927840 Gene

No data available for Paralogs for LOC101927840 Gene

Variants for LOC101927840 Gene

Additional dbSNP identifiers (rs#s) for LOC101927840 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927840 Gene

Disorders for LOC101927840 Gene

No disorders were found for LOC101927840 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927840 Gene

Publications for LOC101927840 Gene

  1. Multiple common variants for celiac disease influencing immune gene expression. (PMID: 20190752) Dubois PC … van Heel DA (Nature genetics 2010) 3 54

No data available for Mastermind for LOC101927840 Gene

Products for LOC101927840 Gene

Sources for LOC101927840 Gene