Aliases for LOC101927825 Gene

Subcategory (RNA class) for LOC101927825 Gene

ncRNA

Aliases for LOC101927825 Gene

  • Uncharacterized LOC101927825 3

External Ids for LOC101927825 Gene

Previous GeneCards Identifiers for LOC101927825 Gene

  • GC11U901995

Summaries for LOC101927825 Gene

GeneCards Summary for LOC101927825 Gene

LOC101927825 (Uncharacterized LOC101927825) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927825 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927825 Gene

Genomics for LOC101927825 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927825 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J006317 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.8 1763 7 CTCF TEAD4 KDM1A RCOR1 POLR2A PKNOX1 ZFX ZSCAN29 UBTF DPF2 CAVIN3 ENSG00000282556 LOC101927825 lnc-CAVIN3-1 OR56A1 TAF10 piR-58605 SMPD1
GH11J006325 Enhancer 0.5 Ensembl ENCODE dbSUPER 0.4 +8.3 8260 3.2 CAVIN3 OR56A1 ENSG00000282556 LOC101927825 piR-58605 SMPD1
GH11J006333 Enhancer 0.5 Ensembl 0.4 +14.3 14260 0.8 CEBPB EP300 STAT3 TCF7L2 MAFK ZNF660 GATA2 CAVIN3 LOC101927825 ENSG00000282556 piR-58605 SMPD1
GH11J006324 Enhancer 0.3 Ensembl 0.4 +5.9 5860 0.8 MTA2 CAVIN3 OR56A1 ENSG00000282556 LOC101927825 piR-58605 SMPD1
GH11J006338 Enhancer 0.2 Ensembl 0.4 +20.2 20160 1 piR-58605 CAVIN3 LOC101927825 ENSG00000282556 SMPD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927825 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927825 Gene

Genomic Locations for LOC101927825 Gene
chr11:6,319,141-6,346,369
(GRCh38/hg38)
Size:
27,229 bases
Orientation:
Plus strand

Genomic View for LOC101927825 Gene

Genes around LOC101927825 on UCSC Golden Path with GeneCards custom track
LOC101927825 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101927825 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927825 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927825 Gene

Proteins for LOC101927825 Gene

Post-translational modifications for LOC101927825 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927825 Gene

Domains & Families for LOC101927825 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927825 Gene

Function for LOC101927825 Gene

Phenotypes From GWAS Catalog for LOC101927825 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927825 Gene

Localization for LOC101927825 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927825 Gene

Pathways & Interactions for LOC101927825 Gene

PathCards logo

SuperPathways for LOC101927825 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927825 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927825 Gene

Drugs & Compounds for LOC101927825 Gene

No Compound Related Data Available

Transcripts for LOC101927825 Gene

LOC101927825 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927825 Gene

No ASD Table

Relevant External Links for LOC101927825 Gene

GeneLoc Exon Structure for
LOC101927825

No data available for mRNA/cDNA for LOC101927825 Gene

Expression for LOC101927825 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927825 Gene

Orthologs for LOC101927825 Gene

No data available for Orthologs and Evolution for LOC101927825 Gene

Paralogs for LOC101927825 Gene

No data available for Paralogs for LOC101927825 Gene

Variants for LOC101927825 Gene

Additional dbSNP identifiers (rs#s) for LOC101927825 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927825 Gene

Disorders for LOC101927825 Gene

No disorders were found for LOC101927825 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927825 Gene

Publications for LOC101927825 Gene

No publications were found for LOC101927825 Gene.

No data available for Mastermind for LOC101927825 Gene

Products for LOC101927825 Gene

Sources for LOC101927825 Gene