Aliases for LOC101927817 Gene

Data sources for LOC101927817 Gene:

Subcategory (RNA class) for LOC101927817 Gene


Aliases for LOC101927817 Gene

External Ids for LOC101927817 Gene

Previous GeneCards Identifiers for LOC101927817 Gene

  • GC16U901583
  • GC16P089431
  • GC16P089438

Summaries for LOC101927817 Gene

GeneCards Summary for LOC101927817 Gene

LOC101927817 (Uncharacterized LOC101927817) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927817 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927817 Gene

Genomics for LOC101927817 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927817 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927817 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927817 Gene

Latest Assembly
27,138 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
23,577 bases
Plus strand

Genomic View for LOC101927817 Gene

Genes around LOC101927817 on UCSC Golden Path with GeneCards custom track
LOC101927817 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101927817 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927817 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927817 Gene

Proteins for LOC101927817 Gene

Post-translational modifications for LOC101927817 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927817 Gene

Domains & Families for LOC101927817 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927817 Gene

Function for LOC101927817 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927817 Gene

Localization for LOC101927817 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927817 Gene

Pathways & Interactions for LOC101927817 Gene

PathCards logo

SuperPathways for LOC101927817 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927817 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927817 Gene

Drugs & Compounds for LOC101927817 Gene

No Compound Related Data Available

Transcripts for LOC101927817 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101927817 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075AAD3_9606 lncRNA 1819 4

RefSeq: NR_110932,

LncBook: HSALNT0235476,

LNCipedia: lnc-SPG7-4:1,


URS0000759DC8_9606 lncRNA 1820 3

RefSeq: NR_110931,

LncBook: HSALNT0235475,

LNCipedia: lnc-SPG7-4:2,

URS00008B2AD6_9606 lncRNA 1770 2

LNCipedia: lnc-SPG7-4:3,


URS00009C5570_9606 lncRNA 665 2

LncBook: HSALNT0235477,


URS00009C0886_9606 lncRNA 534 2

LncBook: HSALNT0235478,


LOC101927817 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101927817 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927817 Gene

No ASD Table

Relevant External Links for LOC101927817 Gene

GeneLoc Exon Structure for

Expression for LOC101927817 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927817 Gene

Orthologs for LOC101927817 Gene

No data available for Orthologs and Evolution for LOC101927817 Gene

Paralogs for LOC101927817 Gene

No data available for Paralogs for LOC101927817 Gene

Variants for LOC101927817 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101927817 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LOC101927817 Gene

Variant ID Type Subtype PubMed ID
dgv555e214 CNV loss 21293372
esv2758670 CNV gain 17122850
esv3639579 CNV gain 21293372
nsv1063483 CNV gain 25217958
nsv1109037 CNV deletion 24896259
nsv1138486 CNV deletion 24896259
nsv428331 CNV gain+loss 18775914
nsv471118 CNV gain 18288195
nsv482951 CNV loss 15286789
nsv512455 CNV loss 21212237
nsv573735 CNV loss 21841781

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101927817 Gene

Disorders for LOC101927817 Gene

No disorders were found for LOC101927817 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927817 Gene

Publications for LOC101927817 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC101927817 Gene

Products for LOC101927817 Gene

Sources for LOC101927817 Gene