Aliases for LOC101927572 Gene

Aliases for LOC101927572 Gene

  • Uncharacterized LOC101927572 3 5
  • Uncharacterized Protein LOC101927572 3
  • NONHSAG025632.2 91
  • AC002116.2 5

External Ids for LOC101927572 Gene

Previous GeneCards Identifiers for LOC101927572 Gene

  • GC19U901763
  • GC19P036508

Summaries for LOC101927572 Gene

GeneCards Summary for LOC101927572 Gene

LOC101927572 (Uncharacterized LOC101927572) is a Protein Coding gene.

Additional gene information for LOC101927572 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927572 Gene

Genomics for LOC101927572 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927572 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927572 on the GeneHancer Hub at the UCSC Golden Path

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for LOC101927572

Genomic Locations for LOC101927572 Gene

Genomic Locations for LOC101927572 Gene
chr19:36,014,502-36,051,117
(GRCh38/hg38)
Size:
36,616 bases
Orientation:
Plus strand
chr19:36,505,410-36,536,874
(GRCh37/hg19)
Size:
31,465 bases
Orientation:
Plus strand

Genomic View for LOC101927572 Gene

Genes around LOC101927572 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927572 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927572 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927572 Gene

Proteins for LOC101927572 Gene

Post-translational modifications for LOC101927572 Gene

No Post-translational modifications

Other Protein References for LOC101927572 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC101927572 Gene

Domains & Families for LOC101927572 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927572 Gene

Function for LOC101927572 Gene

Phenotypes From GWAS Catalog for LOC101927572 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927572 Gene

Localization for LOC101927572 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927572 Gene

Pathways & Interactions for LOC101927572 Gene

PathCards logo

SuperPathways for LOC101927572 Gene

No Data Available

Interacting Proteins for LOC101927572 Gene

Gene Ontology (GO) - Biological Process for LOC101927572 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927572 Gene

Drugs & Compounds for LOC101927572 Gene

No Compound Related Data Available

Transcripts for LOC101927572 Gene

mRNA/cDNA for LOC101927572 Gene

2 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 RNACentral transcripts :
1 NONCODE transcripts :

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC101927572

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927572 Gene

No ASD Table

Relevant External Links for LOC101927572 Gene

GeneLoc Exon Structure for
LOC101927572

Expression for LOC101927572 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927572 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101927572

genes like me logo Genes that share expression patterns with LOC101927572: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927572 Gene

Orthologs for LOC101927572 Gene

Evolution for LOC101927572 Gene

ENSEMBL:
Gene Tree for LOC101927572 (if available)
TreeFam:
Gene Tree for LOC101927572 (if available)

No data available for Orthologs for LOC101927572 Gene

Paralogs for LOC101927572 Gene

No data available for Paralogs for LOC101927572 Gene

Variants for LOC101927572 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for LOC101927572 Gene

SNP ID Clinical significance and condition Chr 19 pos Variation AA Info Type
691423 Uncertain Significance: Pyloric stenosis; Esophageal atresia 36,032,356(+) A/G INITIATIOR_CODON_VARIANT,MISSENSE_VARIANT,INTRON_VARIANT
691424 Uncertain Significance: Pyloric stenosis; Esophageal atresia 36,017,920(+) C/T MISSENSE_VARIANT,INTRON_VARIANT

Additional dbSNP identifiers (rs#s) for LOC101927572 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101927572 Gene

Variant ID Type Subtype PubMed ID
dgv51n68 CNV loss 17160897
esv1000212 CNV deletion 20482838
esv3644244 CNV gain 21293372
nsv833815 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101927572 Gene

Disorders for LOC101927572 Gene

No disorders were found for LOC101927572 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927572 Gene

Publications for LOC101927572 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

No data available for Mastermind for LOC101927572 Gene

Products for LOC101927572 Gene

Sources for LOC101927572 Gene