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Aliases for LOC101927511 Gene

Subcategory (RNA class) for LOC101927511 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101927511 Gene

  • Uncharacterized LOC101927511 3
  • AP001269.2 5

External Ids for LOC101927511 Gene

Previous GeneCards Identifiers for LOC101927511 Gene

  • GC18U900791
  • GC18M012216
  • GC18M013010
  • GC18M013554
  • GC18M013847
  • GC18M014113
  • GC18M014410
  • GC18M014705
  • GC18M014968

Summaries for LOC101927511 Gene

GeneCards Summary for LOC101927511 Gene

LOC101927511 (Uncharacterized LOC101927511) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927511 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927511 Gene

Genomics for LOC101927511 Gene

GeneHancer (GH) Regulatory Elements for LOC101927511 Gene

Promoters and enhancers for LOC101927511 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J011945 Enhancer 1.6 FANTOM5 Ensembl ENCODE 670.7 +0.4 410 3.8 HDGF FOXA2 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 POLR2B LOC101927511 PTPN2 PSMG2 MPPE1 CHMP1B IMPA2 ENSG00000267661
GH18J011916 Enhancer 0.9 Ensembl dbSUPER 12.7 +31.0 30989 1 LEF1 CEBPG CTBP1 ZNF316 NFE2 ATF7 SMARCE1 SOX6 L3MBTL2 CEBPB MPPE1 LOC101927511 IMPA2 CHMP1B GC18P012708 ENSG00000267661
GH18J011942 Enhancer 0.5 ENCODE 19.2 +4.8 4779 1.8 GTF3C2 JUND POLR3A JUN FOS LOC101927511 PTPN2 PSMG2 ENSG00000267249 MPPE1 IMPA2 ENSG00000267661
GH18J011951 Enhancer 0.8 ENCODE 12 -3.4 -3448 0.8 HDAC1 ATF1 ARNT TCF12 GATA2 POLR3A ATF7 CREM CEBPB NCOA1 LOC101927511 ENSG00000267249 IMPA2 GC18P012646
GH18J011953 Enhancer 1.1 Ensembl ENCODE 7.2 -8.2 -8159 4.7 FOXA2 ARNT ARID4B ZNF48 ZNF280A CBX5 ZNF143 FOS ATF7 SP5 IMPA2 MPPE1 CHMP1B LOC101927511 GC18P012646
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101927511 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927511 Gene

Genomic Locations for LOC101927511 Gene
chr18:11,910,412-11,948,090
(GRCh38/hg38)
Size:
37,679 bases
Orientation:
Minus strand

Genomic View for LOC101927511 Gene

Genes around LOC101927511 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927511 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927511 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927511 Gene

Proteins for LOC101927511 Gene

Post-translational modifications for LOC101927511 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927511 Gene

Domains & Families for LOC101927511 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927511 Gene

Function for LOC101927511 Gene

Phenotypes From GWAS Catalog for LOC101927511 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927511 Gene

Localization for LOC101927511 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927511 Gene

Pathways & Interactions for LOC101927511 Gene

SuperPathways for LOC101927511 Gene

No Data Available

Interacting Proteins for LOC101927511 Gene

Gene Ontology (GO) - Biological Process for LOC101927511 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927511 Gene

Drugs & Compounds for LOC101927511 Gene

No Compound Related Data Available

Transcripts for LOC101927511 Gene

mRNA/cDNA for LOC101927511 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927511 Gene

No ASD Table

Relevant External Links for LOC101927511 Gene

GeneLoc Exon Structure for
LOC101927511

Expression for LOC101927511 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927511 Gene

Orthologs for LOC101927511 Gene

Evolution for LOC101927511 Gene

ENSEMBL:
Gene Tree for LOC101927511 (if available)
TreeFam:
Gene Tree for LOC101927511 (if available)

No data available for Orthologs for LOC101927511 Gene

Paralogs for LOC101927511 Gene

No data available for Paralogs for LOC101927511 Gene

Variants for LOC101927511 Gene

Sequence variations from dbSNP and Humsavar for LOC101927511 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1000023472 -- 11,928,652(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000097329 -- 11,934,235(-) T/C intron_variant
rs1000157433 -- 11,929,459(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000186034 -- 11,911,513(-) T/G genic_downstream_transcript_variant, intron_variant
rs1000212300 -- 11,920,303(-) AGAGAG/AGAG genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927511 Gene

Disorders for LOC101927511 Gene

No disorders were found for LOC101927511 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927511 Gene

Publications for LOC101927511 Gene

No publications were found for LOC101927511 Gene.

Products for LOC101927511 Gene

Sources for LOC101927511 Gene

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