Aliases for LOC101927510 Gene

Subcategory (RNA class) for LOC101927510 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101927510 Gene

  • Uncharacterized LOC101927510 3

External Ids for LOC101927510 Gene

Previous GeneCards Identifiers for LOC101927510 Gene

  • GC17U901838

Summaries for LOC101927510 Gene

GeneCards Summary for LOC101927510 Gene

LOC101927510 (Uncharacterized LOC101927510) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927510 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927510 Gene

Genomics for LOC101927510 Gene

GeneHancer (GH) Regulatory Elements for LOC101927510 Gene

Promoters and enhancers for LOC101927510 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J057254 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 -3.1 -3088 11 PPP1R10 ZBTB40 TCF7L2 CC2D1A RELA L3MBTL2 MAX MNT ZKSCAN8 BCL6B MSI2 MKS1 SRSF1 ENSG00000263004 ENSG00000286732 LOC101927510 lnc-COIL-8 ENSG00000279555
GH17J057269 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -12.8 -12823 0.3 NCOA3 CREB1 RCOR1 ENSG00000279555 MSI2 LOC101927510
GH17J057270 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -14.2 -14164 2 POLR2A RCOR1 ENSG00000279555 LOC101927510 MSI2
GH17J057275 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -12.2 -12223 0.3 SCRT2 SCRT1 ENSG00000279555 MSI2 LOC101927510
GH17J057253 Enhancer 0.4 ENCODE 0.6 +3.3 3288 0.5 ZNF24 ZBTB17 GATAD2B ENSG00000286732 LOC101927510 MSI2 lnc-COIL-8 ENSG00000285785
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927510 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927510 Gene

Genomic Locations for LOC101927510 Gene
chr17:57,252,769-57,257,037
(GRCh38/hg38)
Size:
4,269 bases
Orientation:
Minus strand

Genomic View for LOC101927510 Gene

Genes around LOC101927510 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927510 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927510 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927510 Gene

Proteins for LOC101927510 Gene

Post-translational modifications for LOC101927510 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927510 Gene

Domains & Families for LOC101927510 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927510 Gene

Function for LOC101927510 Gene

Phenotypes From GWAS Catalog for LOC101927510 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927510 Gene

Localization for LOC101927510 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927510 Gene

Pathways & Interactions for LOC101927510 Gene

PathCards logo

SuperPathways for LOC101927510 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927510 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927510 Gene

Drugs & Compounds for LOC101927510 Gene

No Compound Related Data Available

Transcripts for LOC101927510 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927510 Gene

No ASD Table

Relevant External Links for LOC101927510 Gene

GeneLoc Exon Structure for
LOC101927510

No data available for mRNA/cDNA for LOC101927510 Gene

Expression for LOC101927510 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927510 Gene

Orthologs for LOC101927510 Gene

No data available for Orthologs and Evolution for LOC101927510 Gene

Paralogs for LOC101927510 Gene

No data available for Paralogs for LOC101927510 Gene

Variants for LOC101927510 Gene

Sequence variations from dbSNP and Humsavar for LOC101927510 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000481580 -- 57,256,859(-) G/T upstream_transcript_variant
rs1000864676 -- 57,256,234(-) G/A/C upstream_transcript_variant
rs1001616944 -- 57,250,674(-) A/G downstream_transcript_variant
rs1001623642 -- 57,258,137(-) A/G upstream_transcript_variant
rs1001678473 -- 57,257,655(-) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927510 Gene

Disorders for LOC101927510 Gene

No disorders were found for LOC101927510 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927510 Gene

Publications for LOC101927510 Gene

No publications were found for LOC101927510 Gene.

No data available for External Links for LOC101927510 Gene

Products for LOC101927510 Gene

Sources for LOC101927510 Gene