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Aliases for LOC101927503 Gene

Aliases for LOC101927503 Gene

  • Uncharacterized LOC101927503 3
  • Uncharacterized Protein LOC101927503 3
  • AC139749.1 5

External Ids for LOC101927503 Gene

Previous GeneCards Identifiers for LOC101927503 Gene

  • GC11U902012
  • GC11P001055

Summaries for LOC101927503 Gene

GeneCards Summary for LOC101927503 Gene

LOC101927503 (Uncharacterized LOC101927503) is a Protein Coding gene.

Additional gene information for LOC101927503 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927503 Gene

Genomics for LOC101927503 Gene

GeneHancer (GH) Regulatory Elements for LOC101927503 Gene

Promoters and enhancers for LOC101927503 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J001039 Enhancer 1 FANTOM5 ENCODE dbSUPER 650.7 +0.9 891 1.6 MAZ ZSCAN4 MAX CEBPB MNT GLI4 ZNF184 POLR2A MYNN KDM1A LOC101927503 MUC6 AP2A2 CD151 GC11P001047
GH11J000951 Enhancer 1.3 Ensembl ENCODE dbSUPER 7.1 -83.6 -83640 8.4 PKNOX1 FOXA2 MLX ARID4B SIN3A ZNF48 YY1 SLC30A9 ZNF121 ARID2 LOC101927503 POLR2L AP2A2 LOC171391 GC11P000950 RNU6-1025P GC11P000968
GH11J000930 Enhancer 1.2 Ensembl ENCODE dbSUPER 6.8 -104.4 -104396 7.9 PKNOX1 ARID4B ZNF614 SCRT2 FOS EGR2 RXRA CEBPB NR2F2 NFIL3 LOC101927503 POLR2L AP2A2 IRF7 LRRC56 GC11M000925 GC11P000950
GH11J001050 Enhancer 0.7 dbSUPER 6.3 +11.7 11654 0.4 CTCF IRF2 KLF1 KLF17 MAX SIN3A ERF PAX8 ZNF2 ZNF48 AP2A2 SLC25A22 PIDD1 RPLP2 CEND1 LOC101927503 LMNTD2 GC11P001047 PIR44225
GH11J001052 Enhancer 0.7 ENCODE dbSUPER 6.2 +15.2 15247 3.1 STAT1 KLF1 MAZ ZKSCAN8 VEZF1 RCOR1 TCF7L2 MUC2 LOC101927503 AP2A2 GC11P001047 PIR44225
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927503 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927503 Gene

Genomic Locations for LOC101927503 Gene
chr11:1,039,200-1,055,749
(GRCh38/hg38)
Size:
16,550 bases
Orientation:
Plus strand
chr11:1,049,880-1,055,284
(GRCh37/hg19)
Size:
5,405 bases
Orientation:
Plus strand

Genomic View for LOC101927503 Gene

Genes around LOC101927503 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927503 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927503 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927503 Gene

Proteins for LOC101927503 Gene

Post-translational modifications for LOC101927503 Gene

No Post-translational modifications

Other Protein References for LOC101927503 Gene

No data available for DME Specific Peptides for LOC101927503 Gene

Domains & Families for LOC101927503 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927503 Gene

Function for LOC101927503 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927503 Gene

Localization for LOC101927503 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927503 Gene

Pathways & Interactions for LOC101927503 Gene

SuperPathways for LOC101927503 Gene

No Data Available

Interacting Proteins for LOC101927503 Gene

Gene Ontology (GO) - Biological Process for LOC101927503 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927503 Gene

Drugs & Compounds for LOC101927503 Gene

No Compound Related Data Available

Transcripts for LOC101927503 Gene

mRNA/cDNA for LOC101927503 Gene

(4) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927503 Gene

No ASD Table

Relevant External Links for LOC101927503 Gene

GeneLoc Exon Structure for
LOC101927503

Expression for LOC101927503 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927503 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101927503 Gene

This gene is overexpressed in Spleen (x7.5) and Cervix - Endocervix (x5.4).
genes like me logo Genes that share expression patterns with LOC101927503: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927503 Gene

Orthologs for LOC101927503 Gene

Evolution for LOC101927503 Gene

ENSEMBL:
Gene Tree for LOC101927503 (if available)
TreeFam:
Gene Tree for LOC101927503 (if available)

No data available for Orthologs for LOC101927503 Gene

Paralogs for LOC101927503 Gene

No data available for Paralogs for LOC101927503 Gene

Variants for LOC101927503 Gene

Sequence variations from dbSNP and Humsavar for LOC101927503 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000059406 -- 1,054,600(+) A/C 5_prime_UTR_variant, intron_variant
rs1000551802 -- 1,049,228(+) C/T upstream_transcript_variant
rs1000770784 -- 1,049,045(+) G/A upstream_transcript_variant
rs1000991650 -- 1,056,611(+) G/A coding_sequence_variant, genic_downstream_transcript_variant, synonymous_variant
rs1001393996 -- 1,056,135(+) C/T coding_sequence_variant, downstream_transcript_variant, genic_downstream_transcript_variant, missense_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927503 Gene

Disorders for LOC101927503 Gene

Additional Disease Information for LOC101927503

No disorders were found for LOC101927503 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927503 Gene

Publications for LOC101927503 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for LOC101927503 Gene

Sources for LOC101927503 Gene

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