Aliases for LOC101927486 Gene

Data sources for LOC101927486 Gene:

Subcategory (RNA class) for LOC101927486 Gene

ncRNA

Aliases for LOC101927486 Gene

External Ids for LOC101927486 Gene

Previous GeneCards Identifiers for LOC101927486 Gene

  • GC20U900770

Summaries for LOC101927486 Gene

GeneCards Summary for LOC101927486 Gene

LOC101927486 (Uncharacterized LOC101927486) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927486 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927486 Gene

Genomics for LOC101927486 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927486 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J049565 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +0.5 537 6.1 IKZF1 NONO ZNF623 ZNF341 YY1 SP2 ZNF189 TAF1 ZNF398 ZMYM3 PTGIS LOC101927486 SNORD12 HSALNG0130677 HSALNG0130676 B4GALT5
GH20J049561 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.9 -5915 3.6 ZBTB7B NONO ZNF623 MAX PRDM1 TEAD3 SMC3 TBP ADNP FOSL1 PTGIS LOC101927486 HSALNG0130676 KCNB1
GH20J049549 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.8 -16811 4.3 MCM3 CUX1 FOXA2 CTBP1 ESRRA SMARCE1 HNF4A DPF2 ZNF514 SP1 DDX27 PTPN1 SNORD12B PTGIS HSALNG0130676 LOC101927486 KCNB1
GH20J049558 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -8.6 -8636 1.3 ZNF217 CEBPB CUX1 CTBP1 SMARCE1 FOXA1 DPF2 ATF4 EP300 RFX1 LOC101927486 PTGIS HSALNG0130676 KCNB1
GH20J049557 Enhancer 0.8 Ensembl dbSUPER 0.4 -10.4 -10415 1.4 IKZF1 TRIM25 ZNF316 FOSL1 NFE2 SMARCA4 JUND MAFG MAFF DPF2 LOC101927486 PTGIS HSALNG0130676 KCNB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927486 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927486 Gene

Latest Assembly
chr20:49,568,116-49,571,934
(GRCh38/hg38)
Size:
3,819 bases
Orientation:
Plus strand

Genomic View for LOC101927486 Gene

Genes around LOC101927486 on UCSC Golden Path with GeneCards custom track
LOC101927486 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101927486 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927486 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927486 Gene

Proteins for LOC101927486 Gene

Post-translational modifications for LOC101927486 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927486 Gene

Domains & Families for LOC101927486 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927486 Gene

Function for LOC101927486 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927486 Gene

Localization for LOC101927486 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927486 Gene

Pathways & Interactions for LOC101927486 Gene

PathCards logo

SuperPathways for LOC101927486 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927486 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927486 Gene

Drugs & Compounds for LOC101927486 Gene

No Compound Related Data Available

Transcripts for LOC101927486 Gene

LOC101927486 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927486 Gene

No ASD Table

Relevant External Links for LOC101927486 Gene

GeneLoc Exon Structure for
LOC101927486

No data available for mRNA/cDNA for LOC101927486 Gene

Expression for LOC101927486 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927486 Gene

Orthologs for LOC101927486 Gene

No data available for Orthologs and Evolution for LOC101927486 Gene

Paralogs for LOC101927486 Gene

No data available for Paralogs for LOC101927486 Gene

Variants for LOC101927486 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101927486 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927486 Gene

Disorders for LOC101927486 Gene

No disorders were found for LOC101927486 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927486 Gene

Publications for LOC101927486 Gene

No publications were found for LOC101927486 Gene.

No data available for Mastermind for LOC101927486 Gene

Products for LOC101927486 Gene

Sources for LOC101927486 Gene