Aliases for LOC101927476 Gene

Subcategory (RNA class) for LOC101927476 Gene


Number of RNA Genes sources:

3 / 17

Aliases for LOC101927476 Gene

  • Uncharacterized LOC101927476 3
  • NONHSAG054272.2 91
  • Lnc-ATP6AP2-2 165
  • HSALNG0137402 164

External Ids for LOC101927476 Gene

Previous GeneCards Identifiers for LOC101927476 Gene

  • GC0XU901861

Summaries for LOC101927476 Gene

GeneCards Summary for LOC101927476 Gene

LOC101927476 (Uncharacterized LOC101927476) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927476 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927476 Gene

Genomics for LOC101927476 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927476 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ040261 Enhancer 0.9 Ensembl ENCODE 600.7 -0.2 -177 2.6 JUND GABPA SOX6 ZNF341 EP300 ZNF140 MGA TCF7L2 ZNF766 EGR1 ENSG00000236393 LOC101927476 piR-50308-670 BCOR ATP6AP2
GH0XJ040265 Promoter/Enhancer 1.4 ENCODE CraniofacialAtlas 0.7 +4.1 4078 2.8 CTCF IKZF1 REST RAD21 IKZF2 SP1 BRD9 DPF2 TCF12 EP300 ENSG00000236393 LOC101927476 SNODB1661 BCOR ATP6AP2
GH0XJ040273 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +10.3 10323 2 LEF1 IKZF1 JUND PKNOX1 DPF2 HDAC1 SOX6 FOXJ2 TCF12 EP300 BCOR ATP6AP2 LOC101927476 ENSG00000236393 SNODB1661
GH0XJ040278 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +18.3 18309 6.8 RFX1 ZNF692 FOXA1 ZIC2 REST FOXJ2 ZBTB20 RUNX3 HDAC2 ZNF585B MED14 SNODB1661 ENSG00000236393 LOC101927476 BCOR ATP6AP2
GH0XJ040260 Enhancer 0.4 Ensembl 0.7 -2.5 -2477 0.8 EGR1 NRF1 EGR2 ZNF148 LOC101927476 piR-50308-670 BCOR ATP6AP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927476 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927476 Gene

Genomic Locations for LOC101927476 Gene
24,844 bases
Plus strand

Genomic View for LOC101927476 Gene

Genes around LOC101927476 on UCSC Golden Path with GeneCards custom track
LOC101927476 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101927476 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927476 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927476 Gene

Proteins for LOC101927476 Gene

Post-translational modifications for LOC101927476 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927476 Gene

Domains & Families for LOC101927476 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927476 Gene

Function for LOC101927476 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927476 Gene

Localization for LOC101927476 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927476 Gene

Pathways & Interactions for LOC101927476 Gene

PathCards logo

SuperPathways for LOC101927476 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927476 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927476 Gene

Drugs & Compounds for LOC101927476 Gene

No Compound Related Data Available

Transcripts for LOC101927476 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101927476 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075997B_9606 lncRNA 3001 3

RefSeq: NR_110386,

LNCipedia: lnc-ATP6AP2-2:4,


URS00008B2106_9606 lncRNA 746 3

LncBook: HSALNT0281726,

LNCipedia: lnc-ATP6AP2-2:1,


LOC101927476 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC101927476 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927476 Gene

No ASD Table

Relevant External Links for LOC101927476 Gene

GeneLoc Exon Structure for

Expression for LOC101927476 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927476 Gene

genes like me logo Genes that share expression patterns with LOC101927476: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927476 Gene

Orthologs for LOC101927476 Gene

No data available for Orthologs and Evolution for LOC101927476 Gene

Paralogs for LOC101927476 Gene

No data available for Paralogs for LOC101927476 Gene

Variants for LOC101927476 Gene

Additional dbSNP identifiers (rs#s) for LOC101927476 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101927476 Gene

Variant ID Type Subtype PubMed ID
esv33829 CNV loss 17666407

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101927476 Gene

Disorders for LOC101927476 Gene

No disorders were found for LOC101927476 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927476 Gene

Publications for LOC101927476 Gene

No publications were found for LOC101927476 Gene.

No data available for Mastermind for LOC101927476 Gene

Products for LOC101927476 Gene

Sources for LOC101927476 Gene