Aliases for LOC101927434 Gene

Subcategory (RNA class) for LOC101927434 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101927434 Gene

  • Uncharacterized LOC101927434 3
  • Novel Transcript 5
  • NONHSAG001912 92
  • HSALNG0004712 167
  • Lnc-TTLL7-8 168
  • AL138799.4 5

External Ids for LOC101927434 Gene

Previous GeneCards Identifiers for LOC101927434 Gene

  • GC01U903646

Summaries for LOC101927434 Gene

GeneCards Summary for LOC101927434 Gene

LOC101927434 (Uncharacterized LOC101927434) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927434 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927434 Gene

Genomics for LOC101927434 Gene

GeneHancer (GH) Regulatory Elements for LOC101927434 Gene

Promoters and enhancers for LOC101927434 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J081555 Enhancer 0.2 Ensembl 500.7 +1.9 1931 0.6 LOC101927434 MED28P8 ENSG00000227960 ADGRL2 lnc-ADGRL2-4
GH01J081546 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +8.4 8431 6 CTCF TEAD4 JUND KLF4 MEF2C RCOR1 RAD21 TRIM22 ATF2 CTBP1 LOC101927434 MED28P8 ENSG00000227960 lnc-ADGRL2-4 ADGRL2
GH01J081553 Enhancer 0.5 Ensembl 0.7 +3.9 3931 0.6 IKZF3 ZNF843 PRDM6 FEZF1 CTBP1 PRDM10 PKNOX1 ARNT LOC101927434 MED28P8 ENSG00000227960 ADGRL2 lnc-ADGRL2-4
GH01J081583 Enhancer 0.9 UCNEbase Ensembl 0.3 -26.2 -26217 0.3 OSR2 WT1 TCF7L2 IKZF3 ZNF843 ZNF596 MZF1 ARNT ZSCAN30 YY1 ENSG00000234683 lnc-TTLL7-15 LOC101927434 MED28P8 ADGRL2 lnc-ADGRL2-4
GH01J081582 Enhancer 0.7 Ensembl 0.4 -24.9 -24869 0.6 EP300 RELA TRIM22 BCL11A ZNF384 ARNT MEF2B NBN NR2C1 NR2F2 ENSG00000234683 lnc-TTLL7-15 LOC101927434 MED28P8 ADGRL2 lnc-ADGRL2-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927434 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927434 Gene

Genomic Locations for LOC101927434 Gene
chr1:81,513,880-81,557,832
(GRCh38/hg38)
Size:
43,953 bases
Orientation:
Minus strand
chr1:81,979,565-82,023,387
(GRCh37/hg19)
Size:
43,823 bases
Orientation:
Minus strand

Genomic View for LOC101927434 Gene

Genes around LOC101927434 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927434 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927434 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927434 Gene

Proteins for LOC101927434 Gene

Post-translational modifications for LOC101927434 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927434 Gene

Domains & Families for LOC101927434 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927434 Gene

Function for LOC101927434 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927434 Gene

Localization for LOC101927434 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927434 Gene

Pathways & Interactions for LOC101927434 Gene

PathCards logo

SuperPathways for LOC101927434 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101927434 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927434 Gene

Drugs & Compounds for LOC101927434 Gene

No Compound Related Data Available

Transcripts for LOC101927434 Gene

mRNA/cDNA for LOC101927434 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927434 Gene

No ASD Table

Relevant External Links for LOC101927434 Gene

GeneLoc Exon Structure for
LOC101927434

Expression for LOC101927434 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927434 Gene

genes like me logo Genes that share expression patterns with LOC101927434: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927434 Gene

Orthologs for LOC101927434 Gene

Evolution for LOC101927434 Gene

ENSEMBL:
Gene Tree for LOC101927434 (if available)
TreeFam:
Gene Tree for LOC101927434 (if available)

No data available for Orthologs for LOC101927434 Gene

Paralogs for LOC101927434 Gene

No data available for Paralogs for LOC101927434 Gene

Variants for LOC101927434 Gene

Additional dbSNP identifiers (rs#s) for LOC101927434 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927434 Gene

Disorders for LOC101927434 Gene

No disorders were found for LOC101927434 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927434 Gene

Publications for LOC101927434 Gene

No publications were found for LOC101927434 Gene.

No data available for Mastermind for LOC101927434 Gene

Products for LOC101927434 Gene

Sources for LOC101927434 Gene