Aliases for LOC101927269 Gene

Subcategory (RNA class) for LOC101927269 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC101927269 Gene

  • Uncharacterized LOC101927269 3
  • HSALNG0059193 167
  • NONHSAG048082 92
  • Lnc-GNAT3-1 168

External Ids for LOC101927269 Gene

Previous GeneCards Identifiers for LOC101927269 Gene

  • GC07U903646
  • GC07M080330

Summaries for LOC101927269 Gene

GeneCards Summary for LOC101927269 Gene

LOC101927269 (Uncharacterized LOC101927269) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927269 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927269 Gene

Genomics for LOC101927269 Gene

GeneHancer (GH) Regulatory Elements for LOC101927269 Gene

Promoters and enhancers for LOC101927269 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J080372 Enhancer 0.6 Ensembl ENCODE 500.7 +1.7 1668 1.3 TCF12 JUND SREBF1 SP1 LOC101927269 GNAI1 CD36 ENSG00000232667
GH07J080370 Enhancer 0.2 FANTOM5 0.7 +3.6 3555 0.3 CD36 GNAI1 LOC101927269 ENSG00000232667
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927269 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927269 Gene

Genomic Locations for LOC101927269 Gene
chr7:80,371,517-80,374,439
(GRCh38/hg38)
Size:
2,923 bases
Orientation:
Minus strand

Genomic View for LOC101927269 Gene

Genes around LOC101927269 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927269 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927269 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927269 Gene

Proteins for LOC101927269 Gene

Post-translational modifications for LOC101927269 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927269 Gene

Domains & Families for LOC101927269 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927269 Gene

Function for LOC101927269 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927269 Gene

Localization for LOC101927269 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927269 Gene

Pathways & Interactions for LOC101927269 Gene

PathCards logo

SuperPathways for LOC101927269 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC101927269 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927269 Gene

Drugs & Compounds for LOC101927269 Gene

No Compound Related Data Available

Transcripts for LOC101927269 Gene

mRNA/cDNA for LOC101927269 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927269 Gene

No ASD Table

Relevant External Links for LOC101927269 Gene

GeneLoc Exon Structure for
LOC101927269

Expression for LOC101927269 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927269 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC101927269

genes like me logo Genes that share expression patterns with LOC101927269: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927269 Gene

Orthologs for LOC101927269 Gene

No data available for Orthologs and Evolution for LOC101927269 Gene

Paralogs for LOC101927269 Gene

No data available for Paralogs for LOC101927269 Gene

Variants for LOC101927269 Gene

Additional dbSNP identifiers (rs#s) for LOC101927269 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101927269 Gene

Variant ID Type Subtype PubMed ID
dgv6513n100 CNV gain 25217958
esv3613850 CNV gain 21293372
nsv525104 CNV loss 19592680
nsv831042 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101927269 Gene

Disorders for LOC101927269 Gene

No disorders were found for LOC101927269 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927269 Gene

Publications for LOC101927269 Gene

  1. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. (PMID: 11752456) Xu XR … Han ZG (Proceedings of the National Academy of Sciences of the United States of America 2001) 3 54
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 54

No data available for Mastermind for LOC101927269 Gene

Products for LOC101927269 Gene

Sources for LOC101927269 Gene