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Aliases for LOC101927237 Gene

Subcategory (RNA class) for LOC101927237 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927237 Gene

  • Uncharacterized LOC101927237 3
  • AC104806.2 5

External Ids for LOC101927237 Gene

Previous GeneCards Identifiers for LOC101927237 Gene

  • GC04U901679

Summaries for LOC101927237 Gene

GeneCards Summary for LOC101927237 Gene

LOC101927237 (Uncharacterized LOC101927237) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927237 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927237 Gene

Genomics for LOC101927237 Gene

GeneHancer (GH) Regulatory Elements for LOC101927237 Gene

Promoters and enhancers for LOC101927237 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I067543 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.5 -76.9 -76882 2.8 HDGF PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CENPC UBA6 YTHDC1 LOC101927237 ENSG00000270257 STAP1 GCOM2 GC04M067379
GH04I067522 Enhancer 0.9 ENCODE 21.2 -54.9 -54869 1.8 HDGF PKNOX1 ATF1 ARNT NCOA2 TCF12 POLR2B ATF7 NCOA1 ZNF592 LOC101927237 CENPC STAP1 GC04M067379
GH04I067558 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 11.6 -90.4 -90415 1.2 BMI1 BATF POLR2A NFATC1 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 SMARCA5 STAP1 LOC101927237 CENPC
GH04I067574 Enhancer 1.3 Ensembl ENCODE dbSUPER 6.9 -107.9 -107861 2.8 ARNT POLR2B ZNF766 RUNX3 GTF2B ZNF518A ZNF592 MEF2D MYNN NBN CENPC UBA6 STAP1 LOC101927237 GC04P067584
GH04I067437 Enhancer 0.7 Ensembl ENCODE 10 +30.0 29998 1.4 ATF4 CEBPA CEBPB CEBPG NR2C2 RNA5SP527 CENPC LOC101927237 GC04M067430 RNU1-63P GC04M067379
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101927237 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927237 Gene

Genomic Locations for LOC101927237 Gene
chr4:67,417,305-67,468,251
(GRCh38/hg38)
Size:
50,947 bases
Orientation:
Minus strand
chr4:68,283,023-68,333,969
(GRCh37/hg19)

Genomic View for LOC101927237 Gene

Genes around LOC101927237 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927237 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927237 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927237 Gene

Proteins for LOC101927237 Gene

Post-translational modifications for LOC101927237 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927237 Gene

Domains & Families for LOC101927237 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927237 Gene

Function for LOC101927237 Gene

Phenotypes From GWAS Catalog for LOC101927237 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927237 Gene

Localization for LOC101927237 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927237 Gene

Pathways & Interactions for LOC101927237 Gene

SuperPathways for LOC101927237 Gene

No Data Available

Interacting Proteins for LOC101927237 Gene

Gene Ontology (GO) - Biological Process for LOC101927237 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927237 Gene

Drugs & Compounds for LOC101927237 Gene

No Compound Related Data Available

Transcripts for LOC101927237 Gene

mRNA/cDNA for LOC101927237 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927237 Gene

No ASD Table

Relevant External Links for LOC101927237 Gene

GeneLoc Exon Structure for
LOC101927237

Expression for LOC101927237 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927237 Gene

genes like me logo Genes that share expression patterns with LOC101927237: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927237 Gene

Orthologs for LOC101927237 Gene

Evolution for LOC101927237 Gene

ENSEMBL:
Gene Tree for LOC101927237 (if available)
TreeFam:
Gene Tree for LOC101927237 (if available)

No data available for Orthologs for LOC101927237 Gene

Paralogs for LOC101927237 Gene

No data available for Paralogs for LOC101927237 Gene

Variants for LOC101927237 Gene

Sequence variations from dbSNP and Humsavar for LOC101927237 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000074402 -- 67,422,277(-) T/C upstream_transcript_variant
rs1000503244 -- 67,422,146(-) G/A upstream_transcript_variant
rs10009461 -- 67,418,454(-) A/C non_coding_transcript_variant
rs1001617648 -- 67,417,459(-) T/C non_coding_transcript_variant
rs10016193 -- 67,417,163(-) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101927237 Gene

Variant ID Type Subtype PubMed ID
esv3600848 CNV gain 21293372
dgv5241n100 CNV gain 25217958

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101927237 Gene

Disorders for LOC101927237 Gene

Additional Disease Information for LOC101927237

No disorders were found for LOC101927237 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927237 Gene

Publications for LOC101927237 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC101927237 Gene

Sources for LOC101927237 Gene

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