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Aliases for LOC101927226 Gene
Subcategory (RNA class) for LOC101927226 Gene
ncRNA
Quality Score for this RNA gene is
13
Aliases for LOC101927226 Gene
- Uncharacterized LOC101927226 3
External Ids for LOC101927226 Gene
- Entrez Gene: 101927226
Previous GeneCards Identifiers for LOC101927226 Gene
- GC11U902062
- GC11P059385
Summaries for LOC101927226 Gene
GeneCards Summary for LOC101927226 Gene
LOC101927226 (Uncharacterized LOC101927226) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC101927226 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927226 Gene
Genomics for LOC101927226 Gene
GeneHancer (GH) Regulatory Elements for LOC101927226 Gene
Promoters and enhancers for LOC101927226 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J059610 | Promoter/Enhancer | 2 | EPDnew Ensembl ENCODE CraniofacialAtlas | 0.6 | -2.2 | -2205 | 8.2 | ZNF24 ZBTB40 SP1 SREBF1 FOXA1 SMARCE1 POLR2A CEBPZ USF2 ATF1 | OSBP ENSG00000255008 STX3 MS4A2 ENSG00000255139 LOC101927226 MIR3162 | |
| GH11J059618 | Enhancer | 0.9 | Ensembl ENCODE | 0.6 | +2.3 | 2346 | 0.3 | ZBTB40 SMARCE1 CBFA2T2 SMARCA4 TRIM24 DPF2 ZSCAN4 PKNOX1 HDAC1 MTA2 | LOC101927226 piR-57133-078 ENSG00000255139 | |
| GH11J059623 | Enhancer | 0.6 | Ensembl | 0.4 | +7.1 | 7112 | 0.8 | NR2F6 HLF CEBPG PPARG CEBPA RXRB FOXA2 CEBPB NFIL3 FOXA3 | MS4A6A LOC101927226 piR-57133-078 ENSG00000255139 | |
| GH11J059620 | Enhancer | 0.3 | Ensembl | 0.6 | +3.8 | 3812 | 0.2 | ZBTB33 | MS4A6A LOC101927226 piR-57133-078 ENSG00000255139 | |
| GH11J059625 | Enhancer | 0.2 | Ensembl | 0.4 | +9.8 | 9812 | 0.6 | LOC101927226 piR-57133-078 ENSG00000255139 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC101927226 on UCSC Golden Path with GeneCards custom track
Genomic Locations for LOC101927226 Gene
Genomic Locations for LOC101927226 Gene
- chr11:59,616,289-59,635,536
- (GRCh38/hg38)
- Size:
- 19,248 bases
- Orientation:
- Plus strand
- chr11:59,383,902-59,407,334
- (GRCh37/hg19)
- Size:
- 23,433 bases
- Orientation:
- Plus strand
Genomic View for LOC101927226 Gene
Genes around LOC101927226 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q12.1 by Entrez Gene
LOC101927226 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC101927226 Gene
Proteins for LOC101927226 Gene
Post-translational modifications for LOC101927226 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC101927226
- Origene Custom Protein Services for LOC101927226
No data available for DME Specific Peptides for LOC101927226 Gene
Domains & Families for LOC101927226 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927226 Gene
Function for LOC101927226 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927226 Gene
Localization for LOC101927226 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927226 Gene
Transcripts for LOC101927226 Gene
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC101927226 Gene
- GeneLoc Exon Structure for
- LOC101927226
No data available for mRNA/cDNA for LOC101927226 Gene
Expression for LOC101927226 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927226 Gene
Orthologs for LOC101927226 Gene
No data available for Orthologs and Evolution for LOC101927226 Gene
Paralogs for LOC101927226 Gene
No data available for Paralogs for LOC101927226 Gene
Variants for LOC101927226 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000022095 | -- | 59,628,915(+) | A/G | intron_variant | |
| rs1000121202 | -- | 59,620,847(+) | G/A | intron_variant | |
| rs1000138112 | -- | 59,628,405(+) | C/G | intron_variant | |
| rs1000461128 | -- | 59,622,240(+) | TTTTTTT/TTTTTT/TTTTTTTT | intron_variant | |
| rs1000730894 | -- | 59,630,201(+) | A/C | intron_variant |
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927226 Gene
Disorders for LOC101927226 Gene
No disorders were found for LOC101927226 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927226 Gene
Publications for LOC101927226 Gene
No publications were found for LOC101927226 Gene.
No data available for External Links for LOC101927226 Gene
Products for LOC101927226 Gene
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Sources for LOC101927226 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource