Aliases for LOC101927226 Gene

Subcategory (RNA class) for LOC101927226 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101927226 Gene

  • Uncharacterized LOC101927226 3

External Ids for LOC101927226 Gene

Previous GeneCards Identifiers for LOC101927226 Gene

  • GC11U902062
  • GC11P059385

Summaries for LOC101927226 Gene

GeneCards Summary for LOC101927226 Gene

LOC101927226 (Uncharacterized LOC101927226) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927226 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927226 Gene

Genomics for LOC101927226 Gene

GeneHancer (GH) Regulatory Elements for LOC101927226 Gene

Promoters and enhancers for LOC101927226 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J059610 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.6 -2.2 -2205 8.2 ZNF24 ZBTB40 SP1 SREBF1 FOXA1 SMARCE1 POLR2A CEBPZ USF2 ATF1 OSBP ENSG00000255008 STX3 MS4A2 ENSG00000255139 LOC101927226 MIR3162
GH11J059618 Enhancer 0.9 Ensembl ENCODE 0.6 +2.3 2346 0.3 ZBTB40 SMARCE1 CBFA2T2 SMARCA4 TRIM24 DPF2 ZSCAN4 PKNOX1 HDAC1 MTA2 LOC101927226 piR-57133-078 ENSG00000255139
GH11J059623 Enhancer 0.6 Ensembl 0.4 +7.1 7112 0.8 NR2F6 HLF CEBPG PPARG CEBPA RXRB FOXA2 CEBPB NFIL3 FOXA3 MS4A6A LOC101927226 piR-57133-078 ENSG00000255139
GH11J059620 Enhancer 0.3 Ensembl 0.6 +3.8 3812 0.2 ZBTB33 MS4A6A LOC101927226 piR-57133-078 ENSG00000255139
GH11J059625 Enhancer 0.2 Ensembl 0.4 +9.8 9812 0.6 LOC101927226 piR-57133-078 ENSG00000255139
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927226 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927226 Gene

Genomic Locations for LOC101927226 Gene
chr11:59,616,289-59,635,536
(GRCh38/hg38)
Size:
19,248 bases
Orientation:
Plus strand
chr11:59,383,902-59,407,334
(GRCh37/hg19)
Size:
23,433 bases
Orientation:
Plus strand

Genomic View for LOC101927226 Gene

Genes around LOC101927226 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927226 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927226 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927226 Gene

Proteins for LOC101927226 Gene

Post-translational modifications for LOC101927226 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927226 Gene

Domains & Families for LOC101927226 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927226 Gene

Function for LOC101927226 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927226 Gene

Localization for LOC101927226 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927226 Gene

Pathways & Interactions for LOC101927226 Gene

PathCards logo

SuperPathways for LOC101927226 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927226 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927226 Gene

Drugs & Compounds for LOC101927226 Gene

No Compound Related Data Available

Transcripts for LOC101927226 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927226 Gene

No ASD Table

Relevant External Links for LOC101927226 Gene

GeneLoc Exon Structure for
LOC101927226

No data available for mRNA/cDNA for LOC101927226 Gene

Expression for LOC101927226 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927226 Gene

genes like me logo Genes that share expression patterns with LOC101927226: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927226 Gene

Orthologs for LOC101927226 Gene

No data available for Orthologs and Evolution for LOC101927226 Gene

Paralogs for LOC101927226 Gene

No data available for Paralogs for LOC101927226 Gene

Variants for LOC101927226 Gene

Sequence variations from dbSNP and Humsavar for LOC101927226 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000022095 -- 59,628,915(+) A/G intron_variant
rs1000121202 -- 59,620,847(+) G/A intron_variant
rs1000138112 -- 59,628,405(+) C/G intron_variant
rs1000461128 -- 59,622,240(+) TTTTTTT/TTTTTT/TTTTTTTT intron_variant
rs1000730894 -- 59,630,201(+) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927226 Gene

Disorders for LOC101927226 Gene

No disorders were found for LOC101927226 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927226 Gene

Publications for LOC101927226 Gene

No publications were found for LOC101927226 Gene.

No data available for External Links for LOC101927226 Gene

Products for LOC101927226 Gene

Sources for LOC101927226 Gene