Aliases for LOC101927082 Gene

Subcategory (RNA class) for LOC101927082 Gene

ncRNA

Aliases for LOC101927082 Gene

  • Uncharacterized LOC101927082 3

External Ids for LOC101927082 Gene

Previous GeneCards Identifiers for LOC101927082 Gene

  • GC06U902360
  • GC06P051599

Summaries for LOC101927082 Gene

GeneCards Summary for LOC101927082 Gene

LOC101927082 (Uncharacterized LOC101927082) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927082 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927082 Gene

Genomics for LOC101927082 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J051619 Enhancer 0.5 Ensembl 0.7 -2.6 -2569 0.6 SP1 CTCF ZNF316 MAFF MAFK HNF4A LOC101927082 ENSG00000228689 PKHD1 TFAP2B
GH06J051603 Enhancer 0.3 UCNEbase 0.4 -18.3 -18333 0.3 ENSG00000228689 LOC101927082 PKHD1 TFAP2B
GH06J051644 Enhancer 0.2 ENCODE 0.4 +22.8 22788 0.1 LOC105375087 LOC101927082 PKHD1 TFAP2B
GH06J051648 Enhancer 0.2 Ensembl 0.3 +26.5 26531 0.4 LOC105375087 LOC101927082 PKHD1 TFAP2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927082 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927082 Gene

Genomic Locations for LOC101927082 Gene
chr6:51,621,870-51,622,577
(GRCh38/hg38)
Size:
708 bases
Orientation:
Plus strand

Genomic View for LOC101927082 Gene

Genes around LOC101927082 on UCSC Golden Path with GeneCards custom track
LOC101927082 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC101927082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927082 Gene

Proteins for LOC101927082 Gene

Post-translational modifications for LOC101927082 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927082 Gene

Domains & Families for LOC101927082 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927082 Gene

Function for LOC101927082 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927082 Gene

Localization for LOC101927082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927082 Gene

Pathways & Interactions for LOC101927082 Gene

PathCards logo

SuperPathways for LOC101927082 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927082 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927082 Gene

Drugs & Compounds for LOC101927082 Gene

No Compound Related Data Available

Transcripts for LOC101927082 Gene

LOC101927082 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

mRNA/cDNA for LOC101927082 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927082 Gene

No ASD Table

Relevant External Links for LOC101927082 Gene

GeneLoc Exon Structure for
LOC101927082

Expression for LOC101927082 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC101927082 Gene

genes like me logo Genes that share expression patterns with LOC101927082: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927082 Gene

Orthologs for LOC101927082 Gene

No data available for Orthologs and Evolution for LOC101927082 Gene

Paralogs for LOC101927082 Gene

No data available for Paralogs for LOC101927082 Gene

Variants for LOC101927082 Gene

Additional dbSNP identifiers (rs#s) for LOC101927082 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC101927082 Gene

Variant ID Type Subtype PubMed ID
esv3608980 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC101927082 Gene

Disorders for LOC101927082 Gene

No disorders were found for LOC101927082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927082 Gene

Publications for LOC101927082 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3

No data available for Mastermind for LOC101927082 Gene

Products for LOC101927082 Gene

Sources for LOC101927082 Gene