Aliases for LOC101927057 Gene

Subcategory (RNA class) for LOC101927057 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC101927057 Gene

  • Uncharacterized LOC101927057 3

External Ids for LOC101927057 Gene

Previous GeneCards Identifiers for LOC101927057 Gene

  • GC17U901817

Summaries for LOC101927057 Gene

GeneCards Summary for LOC101927057 Gene

LOC101927057 (Uncharacterized LOC101927057) is an RNA Gene, and is affiliated with the ncRNA class. Among its related pathways are RET signaling and p75 NTR receptor-mediated signalling.

Additional gene information for LOC101927057 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927057 Gene

Genomics for LOC101927057 Gene

GeneHancer (GH) Regulatory Elements for LOC101927057 Gene

Promoters and enhancers for LOC101927057 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J031273 Promoter/Enhancer 1.1 Ensembl ENCODE 750.6 +1.0 983 1.6 FOXA1 MYC MAX ELF3 SP1 TFE3 CEBPG ZNF644 CEBPA GATAD2A LOC101927057 UTP6 GOSR1 OMG SUZ12 EVI2A NF1 TEFM ATAD5 lnc-OMG-1
GH17J031267 Enhancer 0.9 Ensembl ENCODE 0.4 +6.4 6401 3.4 USF2 SP1 BCL6B MAFK CEBPG PRDM1 POLR2A CEBPA PRDM10 GATAD2A OMG EVI2A NF1 RAB11FIP4 LOC101927057 lnc-OMG-2
GH17J031272 Enhancer 0.5 FANTOM5 0.6 +2.7 2747 0.6 MAFK ZNF316 MAFF EMSY OMG EVI2A NF1 RAB11FIP4 LRRC37BP1 LOC101927057 lnc-OMG-1 lnc-OMG-2
GH17J031248 Enhancer 0.8 Ensembl ENCODE 0.3 +24.8 24801 5 CEBPG PRDM1 ZNF644 IKZF1 POLR2A CEBPA IKZF2 RUNX3 FOS FOXA2 OMG EVI2A NF1 RAB11FIP4 LOC101927057 lnc-OMG-2
GH17J031278 Enhancer 0.3 Ensembl 0.6 -3.0 -2999 0.2 ZNF362 EVI2A NF1 LOC101927057 piR-48209-288 lnc-OMG-1 OMG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927057 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927057 Gene

Genomic Locations for LOC101927057 Gene
chr17:31,272,011-31,275,502
(GRCh38/hg38)
Size:
3,492 bases
Orientation:
Minus strand

Genomic View for LOC101927057 Gene

Genes around LOC101927057 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927057 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927057 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927057 Gene

Proteins for LOC101927057 Gene

Post-translational modifications for LOC101927057 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927057 Gene

Domains & Families for LOC101927057 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927057 Gene

Function for LOC101927057 Gene

Phenotypes From GWAS Catalog for LOC101927057 Gene

genes like me logo Genes that share phenotypes with LOC101927057: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927057 Gene

Localization for LOC101927057 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927057 Gene

Pathways & Interactions for LOC101927057 Gene

genes like me logo Genes that share pathways with LOC101927057: view

Gene Ontology (GO) - Biological Process for LOC101927057 Gene

None

No data available for SIGNOR curated interactions for LOC101927057 Gene

Drugs & Compounds for LOC101927057 Gene

No Compound Related Data Available

Transcripts for LOC101927057 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927057 Gene

No ASD Table

Relevant External Links for LOC101927057 Gene

GeneLoc Exon Structure for
LOC101927057

No data available for mRNA/cDNA for LOC101927057 Gene

Expression for LOC101927057 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927057 Gene

Orthologs for LOC101927057 Gene

No data available for Orthologs and Evolution for LOC101927057 Gene

Paralogs for LOC101927057 Gene

No data available for Paralogs for LOC101927057 Gene

Variants for LOC101927057 Gene

Sequence variations from dbSNP and Humsavar for LOC101927057 Gene

SNP ID Clin Chr 17 pos Variation AA Info Type
rs1000817547 -- 31,272,485(-) A/G non_coding_transcript_variant
rs1001165013 -- 31,272,766(-) C/G splice_acceptor_variant
rs1001766487 -- 31,274,949(-) G/T upstream_transcript_variant
rs1002217382 -- 31,274,683(-) T/A upstream_transcript_variant
rs1003500262 -- 31,273,140(-) A/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927057 Gene

Disorders for LOC101927057 Gene

No disorders were found for LOC101927057 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101927057 Gene

Publications for LOC101927057 Gene

No publications were found for LOC101927057 Gene.

No data available for External Links for LOC101927057 Gene

Products for LOC101927057 Gene

Sources for LOC101927057 Gene