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Aliases for LOC101927051 Gene

Subcategory (RNA class) for LOC101927051 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101927051 Gene

  • Uncharacterized LOC101927051 3
  • Z83844.2 5

External Ids for LOC101927051 Gene

Previous GeneCards Identifiers for LOC101927051 Gene

  • GC22U900902
  • GC22M040114

Summaries for LOC101927051 Gene

GeneCards Summary for LOC101927051 Gene

LOC101927051 (Uncharacterized LOC101927051) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101927051 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101927051 Gene

Genomics for LOC101927051 Gene

GeneHancer (GH) Regulatory Elements for LOC101927051 Gene

Promoters and enhancers for LOC101927051 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I037657 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 564.2 -1.8 -1784 5.3 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 LOC101927051 GC22M042628 PDXP GGA1 SH3BP1 DDX17 GC22P037667 GC22M042660
GH22I037672 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13 -17.2 -17182 6.7 HDGF ARNT ARID4B SIN3A ZNF2 SLC30A9 POLR2B ZNF766 ZNF213 FOS GC22M042660 GC22P037676 GC22P037677 LGALS1 GGA1 SH3BP1 LOC101927051 DDX17 H1F0 GCAT
GH22I037683 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.6 -27.4 -27383 3.7 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 IRF4 YY1 ENSG00000100101 NOL12 ENSG00000230912 CSNK1E CBY1 TRIOBP ANKRD54 ENSG00000228274 DDX17 FAM227A
GH22I037679 Enhancer 1 Ensembl ENCODE 11.7 -22.5 -22516 2.8 HDGF HDAC1 ZSCAN4 ARID4B ZNF76 SIN3A KLF5 IRF4 THRB RAD21 NOL12 LOC101927051 SH3BP1 ENSG00000100101 NCF4-AS1 PLA2G6 LGALS1 GC22P037676 GC22P037677
GH22I037727 Enhancer 1 Ensembl ENCODE dbSUPER 11.5 -70.0 -69979 2 CEBPB CEBPG ATF2 ATF4 ATF3 IKZF1 CEBPA PRDM10 ATF7 PRDM1 ANKRD54 TRIOBP ENSG00000100101 LGALS1 LOC101927051 PDXP GCAT H1F0 GGA1 MIR659
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101927051 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101927051 Gene

Genomic Locations for LOC101927051 Gene
chr22:37,641,832-37,658,377
(GRCh38/hg38)
Size:
16,546 bases
Orientation:
Minus strand
chr22:38,037,839-38,054,384
(GRCh37/hg19)

Genomic View for LOC101927051 Gene

Genes around LOC101927051 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101927051 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927051 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927051 Gene

Proteins for LOC101927051 Gene

Post-translational modifications for LOC101927051 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927051 Gene

Domains & Families for LOC101927051 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101927051 Gene

Function for LOC101927051 Gene

Phenotypes From GWAS Catalog for LOC101927051 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927051 Gene

Localization for LOC101927051 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927051 Gene

Pathways & Interactions for LOC101927051 Gene

SuperPathways for LOC101927051 Gene

No Data Available

Interacting Proteins for LOC101927051 Gene

Gene Ontology (GO) - Biological Process for LOC101927051 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101927051 Gene

Drugs & Compounds for LOC101927051 Gene

No Compound Related Data Available

Transcripts for LOC101927051 Gene

mRNA/cDNA for LOC101927051 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927051 Gene

No ASD Table

Relevant External Links for LOC101927051 Gene

GeneLoc Exon Structure for
LOC101927051

Expression for LOC101927051 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101927051 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101927051 Gene

This gene is overexpressed in Whole Blood (x9.8).
genes like me logo Genes that share expression patterns with LOC101927051: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927051 Gene

Orthologs for LOC101927051 Gene

Evolution for LOC101927051 Gene

ENSEMBL:
Gene Tree for LOC101927051 (if available)
TreeFam:
Gene Tree for LOC101927051 (if available)

No data available for Orthologs for LOC101927051 Gene

Paralogs for LOC101927051 Gene

No data available for Paralogs for LOC101927051 Gene

Variants for LOC101927051 Gene

Sequence variations from dbSNP and Humsavar for LOC101927051 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs1000079638 -- 37,642,824(-) G/A non_coding_transcript_variant
rs1000156018 -- 37,658,458(-) C/T upstream_transcript_variant
rs1000231707 -- 37,657,886(-) C/T intron_variant
rs1000396072 -- 37,651,668(-) C/T intron_variant
rs1000802436 -- 37,649,500(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101927051 Gene

Variant ID Type Subtype PubMed ID
esv2758838 CNV loss 17122850
nsv1057617 CNV gain 25217958
nsv1072636 CNV deletion 25765185
nsv471197 CNV loss 18288195
nsv589006 CNV loss 21841781
nsv829203 CNV loss 20364138
nsv834191 CNV loss 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC101927051 Gene

Disorders for LOC101927051 Gene

Additional Disease Information for LOC101927051

No disorders were found for LOC101927051 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927051 Gene

Publications for LOC101927051 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC101927051 Gene

Sources for LOC101927051 Gene

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