Aliases for LOC101927026 Gene

Data sources for LOC101927026 Gene:

Subcategory (RNA class) for LOC101927026 Gene

lncRNA

Aliases for LOC101927026 Gene

External Ids for LOC101927026 Gene

Previous GeneCards Identifiers for LOC101927026 Gene

  • GC16U901585
  • GC16P009514
  • GC16P009184

Summaries for LOC101927026 Gene

GeneCards Summary for LOC101927026 Gene

LOC101927026 (Uncharacterized LOC101927026) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC101927026 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC101927026 Gene

Genomics for LOC101927026 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC101927026 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J009286 Enhancer 0.3 ENCODE 250.7 +0.7 722 0.7 HNF4A LOC101927026 piR-48209-233 piR-47211-225 C16orf72 GRIN2A
GH16J009288 Enhancer 0.2 ENCODE 250.7 +1.7 1699 0 LOC101927026 piR-47211-225 C16orf72 GRIN2A
GH16J009521 Enhancer 0.6 Ensembl ENCODE 4.6 +236.2 236205 1.7 HBP1 ZNF644 POLR2A LOC101927026 RF00017-1959 piR-50437-231 C16orf72 GRIN2A
GH16J009307 Enhancer 1 FANTOM5 Ensembl ENCODE 0.3 +22.6 22589 2.1 MAFF RXRA FOXA2 ZBTB33 JUND ZNF316 HNF4A FOXA1 RAD21 ATF2 HSALNG0109473 piR-37260 piR-57298 LOC101927026 C16orf72 GRIN2A
GH16J009316 Enhancer 0.8 ENCODE 0.3 +30.4 30444 1.2 CEBPA FOXA2 ZNF511 MAFF SMAD4 SAP130 RXRA MIER3 ZSCAN9 RARA piR-48111 piR-57298 LOC101927026 C16orf72 GRIN2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC101927026 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC101927026 Gene

Latest Assembly
chr16:9,286,339-9,657,270
(GRCh38/hg38)
Size:
370,932 bases
Orientation:
Plus strand

Previous Assembly
chr16:9,560,512-9,611,421
(GRCh37/hg19 by Ensembl)
Size:
50,910 bases
Orientation:
Plus strand

Genomic View for LOC101927026 Gene

Genes around LOC101927026 on UCSC Golden Path with GeneCards custom track
LOC101927026 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC101927026 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101927026 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101927026 Gene

Proteins for LOC101927026 Gene

Post-translational modifications for LOC101927026 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101927026 Gene

Domains & Families for LOC101927026 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC101927026 Gene

Function for LOC101927026 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101927026 Gene

Localization for LOC101927026 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101927026 Gene

Pathways & Interactions for LOC101927026 Gene

PathCards logo

SuperPathways for LOC101927026 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC101927026 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC101927026 Gene

Drugs & Compounds for LOC101927026 Gene

No Compound Related Data Available

Transcripts for LOC101927026 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC101927026 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000543A1A_9606 lncRNA 796 4

Ensembl: ENST00000570038 (view in UCSC) ,

LncBook: HSALNT0227522,

LNCipedia: LINC02177:24,

NONCODE: NONHSAT140464.2,

URS0000EEAEAA_9606 lncRNA 3516 1

Ensembl: ENST00000659345 (view in UCSC) ,

URS0000EF5D2E_9606 lncRNA 2095 1

Ensembl: ENST00000653539 (view in UCSC) ,

URS0000EF6684_9606 lncRNA 1975 1

Ensembl: ENST00000660662 (view in UCSC) ,

URS0000EEFF28_9606 lncRNA 1911 1

Ensembl: ENST00000654659 (view in UCSC) ,

LOC101927026 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101927026 Gene

No ASD Table

Relevant External Links for LOC101927026 Gene

GeneLoc Exon Structure for
LOC101927026

No data available for mRNA/cDNA for LOC101927026 Gene

Expression for LOC101927026 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101927026 Gene

Orthologs for LOC101927026 Gene

Evolution for LOC101927026 Gene

ENSEMBL:
Gene Tree for LOC101927026 (if available)
TreeFam:
Gene Tree for LOC101927026 (if available)

No data available for Orthologs for LOC101927026 Gene

Paralogs for LOC101927026 Gene

No data available for Paralogs for LOC101927026 Gene

Variants for LOC101927026 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC101927026 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101927026 Gene

Disorders for LOC101927026 Gene

Additional Disease Information for LOC101927026

Open Targets Platform
Open Targets Platform

No disorders were found for LOC101927026 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101927026 Gene

Publications for LOC101927026 Gene

No publications were found for LOC101927026 Gene.

No data available for Mastermind for LOC101927026 Gene

Products for LOC101927026 Gene

Sources for LOC101927026 Gene